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The map label for this gene is yqhO [H]

Identifier: 226948823

GI number: 226948823

Start: 1757706

End: 1758629

Strand: Direct

Name: yqhO [H]

Synonym: CLM_1725

Alternate gene names: 226948823

Gene position: 1757706-1758629 (Clockwise)

Preceding gene: 226948822

Following gene: 226948824

Centisome position: 42.3

GC content: 30.95

Gene sequence:

>924_bases
TTGTTAAAAGCAGACGGCGTTTTTCAAGGTGGTGGAGTTAAGGCTACAGCTTTTACAGGAGCTATCTGTAGATTAGAAAA
AGAAGGAATGATGTGGCAAAGGCTTGCGGGAACATCCGCAGGAGCTATAATAGCGGCCTTTCTGGCTGTTGGCTATAGAG
GAAAAGAAATAAAAAAAATAATGTACGATTTAGATTATGAAAAGGTTGGAAATATAACTGCTATCAAAAAATTTCCTTTA
GGAAAAAAGTCTTTGGGGCTTATATTAGAAAAGGGTATTTTTAGTACAGTATATATAGAAAAATATCTTGAAGAAATGTT
TAAAAATAAAGGTAAAACTAAATTTAAACATATAAGTTTAAATGGTCAGTCTCCATTGAAAATAATAGCTTCAGATGTTA
CCAATAAAAGATTACTTATATTACCAGATGATATGAAGAAATATGGCATGGATCCTATGGAGCTAGAAATATCTAAAGCA
GTAACAATGAGTATAAGCATTCCTTTCTTTTTTACACCAGTAAAGCTCAAATATATGGGAAAAGAAGCCTATATAGTAGA
CGGAGGAATAACTAGCAATTATCCTATATGGATATTTGATGTAAAGGATGTGCCAAGATGGCCAACCTTTGGTTTTAAAT
TAGGAAATGGTGGAGATGATTTTAATAGAACTATAGAAAATAAGGATTTTATCTCCTACATAGTAGACGTGGTAGAAACA
ACTATAGATTCTTATGATGAAAGTTATTTAAGGGATAAAGATAAAATTAGGACTATATCTATACCGGCCTTAGGAGTAAA
AACTACGGAATTTAATATATCCTTAGAAACTAAGGAAAAATTATATAAAGAAGGTTATGAAAAAGCAGAGGAATTTTTGA
AAAAATGGGATTTTAGAAGATACATAAGATCCTATAGAATTTAA

Upstream 100 bases:

>100_bases
TGTTTAAGTTATATATGTGTAAATTGTACCTATATAAAGTATATTAAAAGTTTAAGGAACATACTATAAAATAAAGCAAT
ATATTTTAAGGTGATTTTAT

Downstream 100 bases:

>100_bases
GAAATCTTAATTAAGTATGTAGATCTTTAGTGTTTTAAACTAATTGTTGTTTTATATAGGTTTATAATTAAAAGTTGTAA
ATTGTTCTAAAATATTGCCC

Product: patatin-like phospholipase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLKADGVFQGGGVKATAFTGAICRLEKEGMMWQRLAGTSAGAIIAAFLAVGYRGKEIKKIMYDLDYEKVGNITAIKKFPL
GKKSLGLILEKGIFSTVYIEKYLEEMFKNKGKTKFKHISLNGQSPLKIIASDVTNKRLLILPDDMKKYGMDPMELEISKA
VTMSISIPFFFTPVKLKYMGKEAYIVDGGITSNYPIWIFDVKDVPRWPTFGFKLGNGGDDFNRTIENKDFISYIVDVVET
TIDSYDESYLRDKDKIRTISIPALGVKTTEFNISLETKEKLYKEGYEKAEEFLKKWDFRRYIRSYRI

Sequences:

>Translated_307_residues
MLKADGVFQGGGVKATAFTGAICRLEKEGMMWQRLAGTSAGAIIAAFLAVGYRGKEIKKIMYDLDYEKVGNITAIKKFPL
GKKSLGLILEKGIFSTVYIEKYLEEMFKNKGKTKFKHISLNGQSPLKIIASDVTNKRLLILPDDMKKYGMDPMELEISKA
VTMSISIPFFFTPVKLKYMGKEAYIVDGGITSNYPIWIFDVKDVPRWPTFGFKLGNGGDDFNRTIENKDFISYIVDVVET
TIDSYDESYLRDKDKIRTISIPALGVKTTEFNISLETKEKLYKEGYEKAEEFLKKWDFRRYIRSYRI
>Mature_307_residues
MLKADGVFQGGGVKATAFTGAICRLEKEGMMWQRLAGTSAGAIIAAFLAVGYRGKEIKKIMYDLDYEKVGNITAIKKFPL
GKKSLGLILEKGIFSTVYIEKYLEEMFKNKGKTKFKHISLNGQSPLKIIASDVTNKRLLILPDDMKKYGMDPMELEISKA
VTMSISIPFFFTPVKLKYMGKEAYIVDGGITSNYPIWIFDVKDVPRWPTFGFKLGNGGDDFNRTIENKDFISYIVDVVET
TIDSYDESYLRDKDKIRTISIPALGVKTTEFNISLETKEKLYKEGYEKAEEFLKKWDFRRYIRSYRI

Specific function: Probable lipid hydrolase [H]

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 35032; Mature: 35032

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKADGVFQGGGVKATAFTGAICRLEKEGMMWQRLAGTSAGAIIAAFLAVGYRGKEIKKI
CCCCCCEECCCCEEEEEHHHHHEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
MYDLDYEKVGNITAIKKFPLGKKSLGLILEKGIFSTVYIEKYLEEMFKNKGKTKFKHISL
HHHCCHHHHCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
NGQSPLKIIASDVTNKRLLILPDDMKKYGMDPMELEISKAVTMSISIPFFFTPVKLKYMG
CCCCCCEEEEECCCCCEEEEECCHHHHHCCCCCEEEEEEEEEEEEECCEEECCEEEEEEC
KEAYIVDGGITSNYPIWIFDVKDVPRWPTFGFKLGNGGDDFNRTIENKDFISYIVDVVET
CEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHH
TIDSYDESYLRDKDKIRTISIPALGVKTTEFNISLETKEKLYKEGYEKAEEFLKKWDFRR
HHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
YIRSYRI
HHHHCCC
>Mature Secondary Structure
MLKADGVFQGGGVKATAFTGAICRLEKEGMMWQRLAGTSAGAIIAAFLAVGYRGKEIKKI
CCCCCCEECCCCEEEEEHHHHHEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
MYDLDYEKVGNITAIKKFPLGKKSLGLILEKGIFSTVYIEKYLEEMFKNKGKTKFKHISL
HHHCCHHHHCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
NGQSPLKIIASDVTNKRLLILPDDMKKYGMDPMELEISKAVTMSISIPFFFTPVKLKYMG
CCCCCCEEEEECCCCCEEEEECCHHHHHCCCCCEEEEEEEEEEEEECCEEECCEEEEEEC
KEAYIVDGGITSNYPIWIFDVKDVPRWPTFGFKLGNGGDDFNRTIENKDFISYIVDVVET
CEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHH
TIDSYDESYLRDKDKIRTISIPALGVKTTEFNISLETKEKLYKEGYEKAEEFLKKWDFRR
HHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
YIRSYRI
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]