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The map label for this gene is 226948663

Identifier: 226948663

GI number: 226948663

Start: 1618762

End: 1619313

Strand: Reverse

Name: 226948663

Synonym: CLM_1559

Alternate gene names: NA

Gene position: 1619313-1618762 (Counterclockwise)

Preceding gene: 226948664

Following gene: 226948644

Centisome position: 38.97

GC content: 29.71

Gene sequence:

>552_bases
ATGAATACTGTATTACAAACTATAAAAAATAGAAGAAGTATAAGAGGTTATAAACCTGAACAAATAAAAGAAGAAGAGCT
TCAATGTATATTAGAAGCTGCAATCTATGCTCCTTCTGGTTGTAATCATCAATCCTGGCATTTTACTGTTATTCAAAACA
GAGACTTAATTACCACTATGAGCAATGTAGCTAAAGAAAAACTTAAGGATTTACCTAATGAGAATTTTAGAAATATGGGT
AATAATGAAAAACTTGATTTAACCCATGGTGCACCTACTTTAATTGTAGTATCAGGGAAAGAAGGTAACTATTCCCCTTT
AGTTGATTGTTCTGCTGCCATAGAAAATATGCTAATTGCTGCTGAAAGCTTAAATATAGGTTCTTTATGGATAGGACTTA
TTTCACTAGCTTTTGAAAATAAAGAAATCATAGAAAAATTAAATATACCTAAGGGATATAAACCTTATTTTGGCATAGCT
TTAGGATATAAAAACGTAAGTGAAGCTAAAGCTCCTAAAAGAAATGAGAATGTAATAACTTACATAAGATAA

Upstream 100 bases:

>100_bases
AAAGTACTCCAGTTAGAAACTACTATATTTTAAATATGCGGGAGTAAAATTAGTATTTTCATTATTGAACAAATTATATG
TTAGTTAGAGGAGGATTTAT

Downstream 100 bases:

>100_bases
GGAAATTATGACTTAAAAGGAAGTTATACTTCCCTTGGTTTAAAAAAGGGATATGTGGTTAGAAAGGCACCTCACTTCAA
TAAGAGATTCTAAATTGTTT

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNTVLQTIKNRRSIRGYKPEQIKEEELQCILEAAIYAPSGCNHQSWHFTVIQNRDLITTMSNVAKEKLKDLPNENFRNMG
NNEKLDLTHGAPTLIVVSGKEGNYSPLVDCSAAIENMLIAAESLNIGSLWIGLISLAFENKEIIEKLNIPKGYKPYFGIA
LGYKNVSEAKAPKRNENVITYIR

Sequences:

>Translated_183_residues
MNTVLQTIKNRRSIRGYKPEQIKEEELQCILEAAIYAPSGCNHQSWHFTVIQNRDLITTMSNVAKEKLKDLPNENFRNMG
NNEKLDLTHGAPTLIVVSGKEGNYSPLVDCSAAIENMLIAAESLNIGSLWIGLISLAFENKEIIEKLNIPKGYKPYFGIA
LGYKNVSEAKAPKRNENVITYIR
>Mature_183_residues
MNTVLQTIKNRRSIRGYKPEQIKEEELQCILEAAIYAPSGCNHQSWHFTVIQNRDLITTMSNVAKEKLKDLPNENFRNMG
NNEKLDLTHGAPTLIVVSGKEGNYSPLVDCSAAIENMLIAAESLNIGSLWIGLISLAFENKEIIEKLNIPKGYKPYFGIA
LGYKNVSEAKAPKRNENVITYIR

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20566; Mature: 20566

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVLQTIKNRRSIRGYKPEQIKEEELQCILEAAIYAPSGCNHQSWHFTVIQNRDLITTM
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHH
SNVAKEKLKDLPNENFRNMGNNEKLDLTHGAPTLIVVSGKEGNYSPLVDCSAAIENMLIA
HHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
AESLNIGSLWIGLISLAFENKEIIEKLNIPKGYKPYFGIALGYKNVSEAKAPKRNENVIT
HCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCEEE
YIR
EEC
>Mature Secondary Structure
MNTVLQTIKNRRSIRGYKPEQIKEEELQCILEAAIYAPSGCNHQSWHFTVIQNRDLITTM
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHH
SNVAKEKLKDLPNENFRNMGNNEKLDLTHGAPTLIVVSGKEGNYSPLVDCSAAIENMLIA
HHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
AESLNIGSLWIGLISLAFENKEIIEKLNIPKGYKPYFGIALGYKNVSEAKAPKRNENVIT
HCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCEEE
YIR
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]