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The map label for this gene is 226948424

Identifier: 226948424

GI number: 226948424

Start: 1367388

End: 1368182

Strand: Reverse

Name: 226948424

Synonym: CLM_1308

Alternate gene names: NA

Gene position: 1368182-1367388 (Counterclockwise)

Preceding gene: 226948434

Following gene: 226948418

Centisome position: 32.93

GC content: 23.27

Gene sequence:

>795_bases
ATGTTTTGTTCTAATTGTGGAAACAAGCTTTCAGAAGATGCTCAGTTTTGTACAAACTGTGGTTCTCCTGTATCAGGTAA
TAAACCAACAAATTTTAAAGATGGAAAAGCTAAAAATGAATTTACTAATTTTTTAAATTTTTTCATTAATTCTTTAAAAA
ATCCTGTAGATAAATTTAATGAATCTATAAAAAATATGAGTCTTTCTATGGTATCTTTATACTTTATAATTCTTACATTA
ATATCTGGACTTATTACTTCTTTTTCAATAAAGAAGTTTATATCTGATTTTCTAGCTTTCTTTTCAAGTTTTGTAGATAA
TACTTTATCCTTTCACGAAAGAGCGTCATTATCTACAGAAATTCAAGGAATTATATCTAAAATGATACCAGTTTCAAAAC
TACTATTTTGGTATATTCTAGGTATTGTGTTGTTCTATGGATTAACAATGTTAATTATGTATATAATAGTTACTTTAATA
ATGAAAAAACAAATTAAGTTTGAAAGTTATTTAAAGGTTTCTTTAATATCTCTTGTAATATATTCAACTTTTACAGTATT
GGCAGTTATAGTAGCATTTTTAAGCTTTATACTTTCAATGCTTATATACTCTTTGGCTCATATACTTGTTATAGTTGTAT
TATATAATGGTTTTAAAAATATAATGGAAGATGATTCTAAAACTCCGTACATATTCTCATTTTCTTATATTATAGCTACT
AATTTATCCTATTATTTTATATTTAAGTCTATAATGCAATACTACCTTATGGCTATAAAAAATAATATTATTTAA

Upstream 100 bases:

>100_bases
TTCATACATTTTATTTTAAAAAATTATCCTTTATGTTATAATTTAGTAGCACTATTTGTTAACCTTTTCTTAATACTATT
AATACTAAAGAGGTGATTTT

Downstream 100 bases:

>100_bases
GATTCACATAAGAACAAAGGATTTACTGCTAAGTATAAAAATATTCCTTAGCAATAAATCCTTTTTAATTTGAAAAATTG
ATATATATATTTTCTCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MFCSNCGNKLSEDAQFCTNCGSPVSGNKPTNFKDGKAKNEFTNFLNFFINSLKNPVDKFNESIKNMSLSMVSLYFIILTL
ISGLITSFSIKKFISDFLAFFSSFVDNTLSFHERASLSTEIQGIISKMIPVSKLLFWYILGIVLFYGLTMLIMYIIVTLI
MKKQIKFESYLKVSLISLVIYSTFTVLAVIVAFLSFILSMLIYSLAHILVIVVLYNGFKNIMEDDSKTPYIFSFSYIIAT
NLSYYFIFKSIMQYYLMAIKNNII

Sequences:

>Translated_264_residues
MFCSNCGNKLSEDAQFCTNCGSPVSGNKPTNFKDGKAKNEFTNFLNFFINSLKNPVDKFNESIKNMSLSMVSLYFIILTL
ISGLITSFSIKKFISDFLAFFSSFVDNTLSFHERASLSTEIQGIISKMIPVSKLLFWYILGIVLFYGLTMLIMYIIVTLI
MKKQIKFESYLKVSLISLVIYSTFTVLAVIVAFLSFILSMLIYSLAHILVIVVLYNGFKNIMEDDSKTPYIFSFSYIIAT
NLSYYFIFKSIMQYYLMAIKNNII
>Mature_264_residues
MFCSNCGNKLSEDAQFCTNCGSPVSGNKPTNFKDGKAKNEFTNFLNFFINSLKNPVDKFNESIKNMSLSMVSLYFIILTL
ISGLITSFSIKKFISDFLAFFSSFVDNTLSFHERASLSTEIQGIISKMIPVSKLLFWYILGIVLFYGLTMLIMYIIVTLI
MKKQIKFESYLKVSLISLVIYSTFTVLAVIVAFLSFILSMLIYSLAHILVIVVLYNGFKNIMEDDSKTPYIFSFSYIIAT
NLSYYFIFKSIMQYYLMAIKNNII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30170; Mature: 30170

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA