Click here to switch to the map view.

The map label for this gene is arcT [H]

Identifier: 226948351

GI number: 226948351

Start: 1286248

End: 1287378

Strand: Direct

Name: arcT [H]

Synonym: CLM_1233

Alternate gene names: 226948351

Gene position: 1286248-1287378 (Clockwise)

Preceding gene: 226948350

Following gene: 226948352

Centisome position: 30.95

GC content: 33.86

Gene sequence:

>1131_bases
ATGAAAATTAAAACTTTTAAAGTAGAGCAGTGGATGAATCAATATGAGAATGATGCAATATATAATTTGGCAGAAACCTG
TATAGATTCATTAACATTGAGAGAATTATTAAATTTAGCTGGAAAGAATTTTGAGGAATATATGGCAAGCCTTGGGGATA
TTCGTATGACATACAGCCATATCTATGGCTCTCCTAGTCTTCTAAAAGGAATAGCTTCTCTTTTTCAGCATGTAAAGGAA
GAACAAATTATACCAACTCATGGAGCTATTGGCGCTAATCATCAGGTACTTATAACTCTTTTGGAACCAGGAGATAGTAT
GGTATCTGTAGCTCCCACTTATCAGCAACATTATTCTATTCCAGAATCTATAAATGCAGAGGTTAATATTCTTAAGCTTT
TACCTGAAAATAATTTTTTACCAGATTTACAAGAGCTAAAGAAAATGGTGAATTCAAATACAAAGCTTATCACGATCAAT
AATCCTAATAATCCATCAGGATCTTTAATTCCAGTAGAGTTACTTAAGCAAATCGCTGATATTGCAAAGAGTGTTGACGC
TTATGTGCTTAGCGATGAGGTCTATAGGGGTATTAGTGAGGATGGAAGTTATATGCCTTCAATAGTTGATTTTTATGAAA
AAGGTATTAGTGTAGGAAGTATGTCAAAAACATTTTCTCTTGCAGGACTTCGTCTTGGGTGGATCGTTTCAAAAGACGAG
AAAATAATTAATTTGTGCAAGGGGAGAAGAGATTACGATACTATAAGTTGTGGTGTTTTGGATGATATTTTTGCTTCTTT
GGCATTAGAAAATAAGGATGCAATTTTAGAGAGAAATCGCAAAATTGTTATGACAAATAGAGATTTACTACATCAGTGGG
TAAGCTCAGAACCAAGAGTATCATATGTAAAGCCAGTTGCCGGGAATACAGCATTAATTTATTACGATGTGGACATGCAT
TCCTATGAATTTTGTGAGAAGCTTTTAAAGGAAACGGGAGTGTTTTATACCCCAGGAGAATGTTTTGACTTAGATTATTG
TTTCCGTATTGGTTATGCCTTTGACTCTAAAACTTTAATGAAGGGGTTAAAGAAAACTAGTGAATTCATATCTAGTCTTC
CTAGTAGATAA

Upstream 100 bases:

>100_bases
ATTTCTAAGACACCCTCTTCTAAGTTAGTTAATATAAATGACCACGACAAGGGGGCTAGTATACCTTGTAAACTATATAT
TGGGGAAAGGAAGATGTTAA

Downstream 100 bases:

>100_bases
TAGGAAGAGAAAATGAGTAAAATTTTAAATATATAATATATAGCAAATATGTGTTATTATTAGACTATGATGATTAATTA
TAGAATTTTCATAAAACTAT

Product: transaminase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKIKTFKVEQWMNQYENDAIYNLAETCIDSLTLRELLNLAGKNFEEYMASLGDIRMTYSHIYGSPSLLKGIASLFQHVKE
EQIIPTHGAIGANHQVLITLLEPGDSMVSVAPTYQQHYSIPESINAEVNILKLLPENNFLPDLQELKKMVNSNTKLITIN
NPNNPSGSLIPVELLKQIADIAKSVDAYVLSDEVYRGISEDGSYMPSIVDFYEKGISVGSMSKTFSLAGLRLGWIVSKDE
KIINLCKGRRDYDTISCGVLDDIFASLALENKDAILERNRKIVMTNRDLLHQWVSSEPRVSYVKPVAGNTALIYYDVDMH
SYEFCEKLLKETGVFYTPGECFDLDYCFRIGYAFDSKTLMKGLKKTSEFISSLPSR

Sequences:

>Translated_376_residues
MKIKTFKVEQWMNQYENDAIYNLAETCIDSLTLRELLNLAGKNFEEYMASLGDIRMTYSHIYGSPSLLKGIASLFQHVKE
EQIIPTHGAIGANHQVLITLLEPGDSMVSVAPTYQQHYSIPESINAEVNILKLLPENNFLPDLQELKKMVNSNTKLITIN
NPNNPSGSLIPVELLKQIADIAKSVDAYVLSDEVYRGISEDGSYMPSIVDFYEKGISVGSMSKTFSLAGLRLGWIVSKDE
KIINLCKGRRDYDTISCGVLDDIFASLALENKDAILERNRKIVMTNRDLLHQWVSSEPRVSYVKPVAGNTALIYYDVDMH
SYEFCEKLLKETGVFYTPGECFDLDYCFRIGYAFDSKTLMKGLKKTSEFISSLPSR
>Mature_376_residues
MKIKTFKVEQWMNQYENDAIYNLAETCIDSLTLRELLNLAGKNFEEYMASLGDIRMTYSHIYGSPSLLKGIASLFQHVKE
EQIIPTHGAIGANHQVLITLLEPGDSMVSVAPTYQQHYSIPESINAEVNILKLLPENNFLPDLQELKKMVNSNTKLITIN
NPNNPSGSLIPVELLKQIADIAKSVDAYVLSDEVYRGISEDGSYMPSIVDFYEKGISVGSMSKTFSLAGLRLGWIVSKDE
KIINLCKGRRDYDTISCGVLDDIFASLALENKDAILERNRKIVMTNRDLLHQWVSSEPRVSYVKPVAGNTALIYYDVDMH
SYEFCEKLLKETGVFYTPGECFDLDYCFRIGYAFDSKTLMKGLKKTSEFISSLPSR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=305, Percent_Identity=23.2786885245902, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI56713254, Length=206, Percent_Identity=30.0970873786408, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI56713256, Length=206, Percent_Identity=30.0970873786408, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI95147551, Length=217, Percent_Identity=27.6497695852535, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI169881279, Length=217, Percent_Identity=27.6497695852535, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI169881281, Length=112, Percent_Identity=33.0357142857143, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI1788722, Length=309, Percent_Identity=26.537216828479, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788627, Length=145, Percent_Identity=32.4137931034483, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788332, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786816, Length=338, Percent_Identity=23.0769230769231, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=198, Percent_Identity=30.3030303030303, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=198, Percent_Identity=30.3030303030303, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17567369, Length=194, Percent_Identity=31.4432989690722, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17567663, Length=240, Percent_Identity=22.9166666666667, Blast_Score=81, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6322401, Length=242, Percent_Identity=28.099173553719, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI18859735, Length=337, Percent_Identity=22.8486646884273, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28573069, Length=205, Percent_Identity=24.390243902439, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24646114, Length=205, Percent_Identity=24.390243902439, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28573067, Length=205, Percent_Identity=24.390243902439, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28573065, Length=205, Percent_Identity=24.390243902439, Blast_Score=78, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42399; Mature: 42399

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTFKVEQWMNQYENDAIYNLAETCIDSLTLRELLNLAGKNFEEYMASLGDIRMTYSH
CCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IYGSPSLLKGIASLFQHVKEEQIIPTHGAIGANHQVLITLLEPGDSMVSVAPTYQQHYSI
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCHHHHCCC
PESINAEVNILKLLPENNFLPDLQELKKMVNSNTKLITINNPNNPSGSLIPVELLKQIAD
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEHHHHHHHHHH
IAKSVDAYVLSDEVYRGISEDGSYMPSIVDFYEKGISVGSMSKTFSLAGLRLGWIVSKDE
HHHHHHHHEECHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCEEEEEEECCCH
KIINLCKGRRDYDTISCGVLDDIFASLALENKDAILERNRKIVMTNRDLLHQWVSSEPRV
HHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHCCCCCE
SYVKPVAGNTALIYYDVDMHSYEFCEKLLKETGVFYTPGECFDLDYCFRIGYAFDSKTLM
EEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHCCCCCCHHHHH
KGLKKTSEFISSLPSR
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIKTFKVEQWMNQYENDAIYNLAETCIDSLTLRELLNLAGKNFEEYMASLGDIRMTYSH
CCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IYGSPSLLKGIASLFQHVKEEQIIPTHGAIGANHQVLITLLEPGDSMVSVAPTYQQHYSI
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCHHHHCCC
PESINAEVNILKLLPENNFLPDLQELKKMVNSNTKLITINNPNNPSGSLIPVELLKQIAD
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEHHHHHHHHHH
IAKSVDAYVLSDEVYRGISEDGSYMPSIVDFYEKGISVGSMSKTFSLAGLRLGWIVSKDE
HHHHHHHHEECHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCEEEEEEECCCH
KIINLCKGRRDYDTISCGVLDDIFASLALENKDAILERNRKIVMTNRDLLHQWVSSEPRV
HHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHCCCCCE
SYVKPVAGNTALIYYDVDMHSYEFCEKLLKETGVFYTPGECFDLDYCFRIGYAFDSKTLM
EEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHCCCCCCHHHHH
KGLKKTSEFISSLPSR
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]