Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
---|---|
Accession | NC_012563 |
Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is 226948293
Identifier: 226948293
GI number: 226948293
Start: 1216625
End: 1217323
Strand: Direct
Name: 226948293
Synonym: CLM_1173
Alternate gene names: NA
Gene position: 1216625-1217323 (Clockwise)
Preceding gene: 226948292
Following gene: 226948295
Centisome position: 29.28
GC content: 28.04
Gene sequence:
>699_bases ATGAAGTTTATAGTAGCAAAAGAAGTTTTTGAGAATCTGGATAATGTATGTTTCGGTATTGTGGTAGCCAAGGGGATTAA TAATAAAGAAAATATTGGAGCTACTCAGCTTTTAAAAGACAGTATAGAATTAATTGAAACAAAATTTAAAGATAAAAATG TAAAAGAAGTAGAAGATATGGTGTATTATAGAGAAGCATTTTTAAAATTAGGTATTAATCCTAATAAATTTAAAAGCTCC ATTGAAGCAATAACTACAAGAGTAGCAAAAAAGAAAGGATTCCCTAATATAAATCCAGTTGTGGATATAGGAAATGCAGT TTCATTAAAATATCTAGTTCCGCTAGGTGCCCATGATATAGATAGTGCCGAAGAAGATATTTGTCTTAGATTTTCAAAAG AAGGGGATACATTTCTTCCTTTTGGTGAAAATGAATTGGAACTTTTAGGAGAGGATGAACTTATTTACTCTGTAGGTAAC AAAGTAAAAACAAGAAGATGGATATGGAGACAAAGTGAACAAGGTAAAATTACTGAAGAAAGCAAAAATATATTTTTCCC TATAGATGGATTTAAAGACAAAAACTATGATAATGTAATTAATGCAAGAGATGAACTAGCAGAAATATTAAAAAAGAATT TTAATTGTGAAATAAAAGTGGGATTTGTAGATATAAATAATACTGAATTTGAATTTTAA
Upstream 100 bases:
>100_bases AGGATAATTAAACTTAAAAGATAATTATGCATATTGATATTATTTTGTTTTTGCTAAATGTCATTACAATGAACTAAATT ATATTTTAAGGGGGATGATT
Downstream 100 bases:
>100_bases ATAATAAATGCAAGGACTTAACTTTTAAATTTACAGCTGTTTTAAATTTATAGATATAAGTACAAGCATAAAGAGATTAG GGTAGATAATCCTAATCTCT
Product: B3/4 domain-containing protein
Products: NA
Alternate protein names: B3/4 Domain-Containing Protein; Solo B3/4 Domain-Containing Protein; Cytoplasmic Protein; Phosphoenolpyruvate Synthase
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKFIVAKEVFENLDNVCFGIVVAKGINNKENIGATQLLKDSIELIETKFKDKNVKEVEDMVYYREAFLKLGINPNKFKSS IEAITTRVAKKKGFPNINPVVDIGNAVSLKYLVPLGAHDIDSAEEDICLRFSKEGDTFLPFGENELELLGEDELIYSVGN KVKTRRWIWRQSEQGKITEESKNIFFPIDGFKDKNYDNVINARDELAEILKKNFNCEIKVGFVDINNTEFEF
Sequences:
>Translated_232_residues MKFIVAKEVFENLDNVCFGIVVAKGINNKENIGATQLLKDSIELIETKFKDKNVKEVEDMVYYREAFLKLGINPNKFKSS IEAITTRVAKKKGFPNINPVVDIGNAVSLKYLVPLGAHDIDSAEEDICLRFSKEGDTFLPFGENELELLGEDELIYSVGN KVKTRRWIWRQSEQGKITEESKNIFFPIDGFKDKNYDNVINARDELAEILKKNFNCEIKVGFVDINNTEFEF >Mature_232_residues MKFIVAKEVFENLDNVCFGIVVAKGINNKENIGATQLLKDSIELIETKFKDKNVKEVEDMVYYREAFLKLGINPNKFKSS IEAITTRVAKKKGFPNINPVVDIGNAVSLKYLVPLGAHDIDSAEEDICLRFSKEGDTFLPFGENELELLGEDELIYSVGN KVKTRRWIWRQSEQGKITEESKNIFFPIDGFKDKNYDNVINARDELAEILKKNFNCEIKVGFVDINNTEFEF
Specific function: Unknown
COG id: COG3382
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26532; Mature: 26532
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIVAKEVFENLDNVCFGIVVAKGINNKENIGATQLLKDSIELIETKFKDKNVKEVEDM CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH VYYREAFLKLGINPNKFKSSIEAITTRVAKKKGFPNINPVVDIGNAVSLKYLVPLGAHDI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEECCCCCC DSAEEDICLRFSKEGDTFLPFGENELELLGEDELIYSVGNKVKTRRWIWRQSEQGKITEE CCCCCCEEEEECCCCCEECCCCCCHHEECCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCC SKNIFFPIDGFKDKNYDNVINARDELAEILKKNFNCEIKVGFVDINNTEFEF CCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MKFIVAKEVFENLDNVCFGIVVAKGINNKENIGATQLLKDSIELIETKFKDKNVKEVEDM CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH VYYREAFLKLGINPNKFKSSIEAITTRVAKKKGFPNINPVVDIGNAVSLKYLVPLGAHDI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEECCCCCC DSAEEDICLRFSKEGDTFLPFGENELELLGEDELIYSVGNKVKTRRWIWRQSEQGKITEE CCCCCCEEEEECCCCCEECCCCCCHHEECCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCC SKNIFFPIDGFKDKNYDNVINARDELAEILKKNFNCEIKVGFVDINNTEFEF CCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA