Click here to switch to the map view.

The map label for this gene is 226948288

Identifier: 226948288

GI number: 226948288

Start: 1211216

End: 1211761

Strand: Direct

Name: 226948288

Synonym: CLM_1168

Alternate gene names: NA

Gene position: 1211216-1211761 (Clockwise)

Preceding gene: 226948287

Following gene: 226948291

Centisome position: 29.15

GC content: 28.02

Gene sequence:

>546_bases
ATGAATTTACATTTAAAGGAATTCAATATTCCAGAGAAAATACTAAAATGGGGAGATTCTCAACCAGCACATCAAAGACA
ACATATAGGAACCCATATAGATTGCTATAATCTATCAAAAATAGAGTTACCATCAGAAATGGATGTTAAGGTAATCGATG
TAAGAAACCTAGATATTATAGACATTGATATACTAGATAATATATCAATTAAAGAAGATTCTTTTGTAATATTTAGAACT
GGATATTTAGAGAACTATGGATACGGAAGTGAGGAGTATTTTAATTCAAAATCAAGTCCATATTTAACTAATGAGCTTGT
AGATAAATTATTAAATTTCAATGTAAAATTAATAGGTATTGATTTAAGTGGAATACAGCATGGGAAACATCATGTAGCCA
TAGATAAATATGTTGAGAATAAAGGAGCTTATGTGGTAGAAAATATATGTAATTTAGATAAAATTGATTCAGAATTTAAG
GCAGATTTAAAGTGGTTCCAACTAGAAGGTGCTACAGCCATAAAAGTTCAGATTGAAACTTTATAA

Upstream 100 bases:

>100_bases
AAAAATGTAGATAGAGAAGAACAAGAAATTGTAGCCAGTTTCTTAAAAAAATTTAATAATTTTTTAGATAAAATAATAGA
GTCAGAAGGAGATGTATAAT

Downstream 100 bases:

>100_bases
ATTCATTGTAATTTAGAAACTATATATATTCCAACTGGATAGAAAATTTACTAAATATAGCTCATGATTTAAATTAATAA
TATTAAAAACCGCTAATTAA

Product: putative cyclase

Products: NA

Alternate protein names: Cyclase; Polyketide Cyclase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRT
GYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFK
ADLKWFQLEGATAIKVQIETL

Sequences:

>Translated_181_residues
MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRT
GYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFK
ADLKWFQLEGATAIKVQIETL
>Mature_181_residues
MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRT
GYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFK
ADLKWFQLEGATAIKVQIETL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20813; Mature: 20813

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDII
CCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCEECCCCCCCEEEEEECCCCEE
DIDILDNISIKEDSFVIFRTGYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGI
EEEEECCCEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE
DLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFKADLKWFQLEGATAIKVQIET
EECCCCCCCEEEEEEEECCCCCCEEEHHHCCCHHCCHHHHCCEEEEEECCCEEEEEEEEE
L
C
>Mature Secondary Structure
MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPSEMDVKVIDVRNLDII
CCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCEECCCCCCCEEEEEECCCCEE
DIDILDNISIKEDSFVIFRTGYLENYGYGSEEYFNSKSSPYLTNELVDKLLNFNVKLIGI
EEEEECCCEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE
DLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFKADLKWFQLEGATAIKVQIET
EECCCCCCCEEEEEEEECCCCCCEEEHHHCCCHHCCHHHHCCEEEEEECCCEEEEEEEEE
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA