Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is 226948227
Identifier: 226948227
GI number: 226948227
Start: 1144316
End: 1145155
Strand: Direct
Name: 226948227
Synonym: CLM_1104
Alternate gene names: NA
Gene position: 1144316-1145155 (Clockwise)
Preceding gene: 226948226
Following gene: 226948228
Centisome position: 27.54
GC content: 24.52
Gene sequence:
>840_bases ATGGAAGTTAGAGCCAAATATCCAGGAAGTTTTGGAGAAATACTTCAAGGAAATTTAGTGGAAAAGCCTATGTTGGTTTC TTCCCCTATAAATTTATATACATGCGTTAGATTATTTGAAAGCAAAAAAGAAAAAAATTTCTATAAAAATATTAAAGCGA ATAAATTTATAAAAAATATACTTACAGATTGGAAATATGAAGATTACATAAATACTATTCATATGGAAATAAATAGCAAA ATTCCAAGAGGAAAAGGCTTAGCTAGTAGTACTGCAGATTTATGTGCTACTTATAAGTGTTTAACCAAATTATTTAAAAA AAATTATTCCATAGAAGAATTACAAAATCATTGTTTAAACATAGAACCTACAGACAGCATAATATTTAATGAATTTACAT TGTTTGATTATAAAAATGGAAGTTTTAAAGAAAAACTGGGTCCCTATATAAAATTTTATATATTGGTTTTTGAAGGAAGT AGAATTATAAATACTCTAGATTTTAATAATAAAAATTTAAAAGAGATGAGTTCGATAGAAGATTTAATATCAGATTTAAA AGAGAGTATAGAAAAAAGAAATATTAAAAATATATCACAGATTTCAGAGGAAAGTATAAAAAGAAATTTTCATAGATTGA CTTATGATTATTTTAATATAGTAGAAAAATATAAAGACCAAACTGGAGGATTGGGCATAATAGGATGCCATAGTGGTGAT GCTTTAGGAATAGTATATGATAATAAAGAAGATTTACTGAAAGCAGAAAAAAATATTATAGATACAGGTAATTTAAAGAA ATATACTCTAGAAACGGTTTTAAATGTTGAGGAGATATAA
Upstream 100 bases:
>100_bases CTTTAAAGTTGATTTATATTTAAAGGGTCTAGGGGCAAATAGAGAATTTCAAAAAATATATAGAGATCATATAAAAGAAG AAATCTAAGGAGAGTATTTC
Downstream 100 bases:
>100_bases ATATATATTTATTTTAATACTGCAAATATAAAAAATATGCTCATAAACTAATTCTATATATAGTTAGCAATAACAAGGGA AGAGTTACATTGTATAAGGA
Product: putative kinase
Products: NA
Alternate protein names: Kinase; Propanediol Utilization Protein PduX; PduX-Like Protein; Protein Involved In Propanediol Utilization; Propanediol Utilization Kinase PduX; L-Threonine Kinase; PduX Protein; Cobalamin Biosynthesis Kinase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MEVRAKYPGSFGEILQGNLVEKPMLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNILTDWKYEDYINTIHMEINSK IPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQNHCLNIEPTDSIIFNEFTLFDYKNGSFKEKLGPYIKFYILVFEGS RIINTLDFNNKNLKEMSSIEDLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKDQTGGLGIIGCHSGD ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
Sequences:
>Translated_279_residues MEVRAKYPGSFGEILQGNLVEKPMLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNILTDWKYEDYINTIHMEINSK IPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQNHCLNIEPTDSIIFNEFTLFDYKNGSFKEKLGPYIKFYILVFEGS RIINTLDFNNKNLKEMSSIEDLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKDQTGGLGIIGCHSGD ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI >Mature_279_residues MEVRAKYPGSFGEILQGNLVEKPMLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNILTDWKYEDYINTIHMEINSK IPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQNHCLNIEPTDSIIFNEFTLFDYKNGSFKEKLGPYIKFYILVFEGS RIINTLDFNNKNLKEMSSIEDLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKDQTGGLGIIGCHSGD ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32290; Mature: 32290
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRAKYPGSFGEILQGNLVEKPMLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNI CCCCCCCCCCHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTDWKYEDYINTIHMEINSKIPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQNHCLN HHCCCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC IEPTDSIIFNEFTLFDYKNGSFKEKLGPYIKFYILVFEGSRIINTLDFNNKNLKEMSSIE CCCCCCEEEEEEEEEECCCCCHHHHHCCCEEEEEEEEECCEEEEEECCCCCCHHHHHHHH DLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKDQTGGLGIIGCHSGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEVRAKYPGSFGEILQGNLVEKPMLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNI CCCCCCCCCCHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTDWKYEDYINTIHMEINSKIPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQNHCLN HHCCCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC IEPTDSIIFNEFTLFDYKNGSFKEKLGPYIKFYILVFEGSRIINTLDFNNKNLKEMSSIE CCCCCCEEEEEEEEEECCCCCHHHHHCCCEEEEEEEEECCEEEEEECCCCCCHHHHHHHH DLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKDQTGGLGIIGCHSGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA