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The map label for this gene is cbiM [H]

Identifier: 226948189

GI number: 226948189

Start: 1115147

End: 1115866

Strand: Direct

Name: cbiM [H]

Synonym: CLM_1064

Alternate gene names: 226948189

Gene position: 1115147-1115866 (Clockwise)

Preceding gene: 226948188

Following gene: 226948190

Centisome position: 26.84

GC content: 33.47

Gene sequence:

>720_bases
ATGAAAAAGAAGTACTTATTTTTATTAACGACCGCACTTGTACTAGCTTTATCACAAAGTGCATATGCCATGCATATTGC
AGAAGGTTTTTTGCCACCTAAGTGGGCAGCACTATATTTTGTTTTAAGTGCACCCTTTATAGTAATAGGTGTAAAACACA
TAAGGCAAAAAACTAAAAAGAACAAGGATTTAAAGATGTTATTAGCAGTAGTTGCAGCCTATGCCTTCATATTATCTGCT
ATGAAAATACCATCAGTTACAGGAAGCTGTTCACATCCAACGGGAACAGGTCTTGCAGCCATAATATTTGGACCATTTGT
AGCATCAGTGGTAGGAGTAATAGTGCTTTTGTTTCAAGCTATATTATTAGCCCATGGTGGAATAACAACTCTTGGAGCTA
ATACTTTTTCTATGGGAATAGTAGGACCAATAGTATCTTATTTAATATATAAAGGATTGAAAAACAAAAATCAAAAATTA
GCTGTATTTTTAGCAGCAAGCTTAGGAGATTTAGCTACATATACTGTTACATCATTACAGTTAGCACTATCTTTCCCAGC
AAAAACAGGGGGAGTTATGGCGGCATTCGCTAAATTTGCTACCATATTTTCTTTAACTCAAATACCACTAGCTATTATAG
AAGGCTTAATAACTATAATGATTTTTGAGTTTATGATGAAATACTCAAAAGAAGAATTAAAAACTTTAAGTGAGGTATAG

Upstream 100 bases:

>100_bases
GGGAAATCAGCAATGACAGCAATAGAATAAAACAGATAACTATATTTTTAATATTATAAAAATACTATAGTTTAATTAAT
AAAAAATAGGAGGGGAAAAA

Downstream 100 bases:

>100_bases
TATATGAAAAAACAAAATATTATTATAACAATAGTATCTGTAGTAGTTATACTTGCTTCTTTATTTATAGGAGGAGCAAG
AGGTGGAGAATTTGCAGGAG

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKKYLFLLTTALVLALSQSAYAMHIAEGFLPPKWAALYFVLSAPFIVIGVKHIRQKTKKNKDLKMLLAVVAAYAFILSA
MKIPSVTGSCSHPTGTGLAAIIFGPFVASVVGVIVLLFQAILLAHGGITTLGANTFSMGIVGPIVSYLIYKGLKNKNQKL
AVFLAASLGDLATYTVTSLQLALSFPAKTGGVMAAFAKFATIFSLTQIPLAIIEGLITIMIFEFMMKYSKEELKTLSEV

Sequences:

>Translated_239_residues
MKKKYLFLLTTALVLALSQSAYAMHIAEGFLPPKWAALYFVLSAPFIVIGVKHIRQKTKKNKDLKMLLAVVAAYAFILSA
MKIPSVTGSCSHPTGTGLAAIIFGPFVASVVGVIVLLFQAILLAHGGITTLGANTFSMGIVGPIVSYLIYKGLKNKNQKL
AVFLAASLGDLATYTVTSLQLALSFPAKTGGVMAAFAKFATIFSLTQIPLAIIEGLITIMIFEFMMKYSKEELKTLSEV
>Mature_239_residues
MKKKYLFLLTTALVLALSQSAYAMHIAEGFLPPKWAALYFVLSAPFIVIGVKHIRQKTKKNKDLKMLLAVVAAYAFILSA
MKIPSVTGSCSHPTGTGLAAIIFGPFVASVVGVIVLLFQAILLAHGGITTLGANTFSMGIVGPIVSYLIYKGLKNKNQKL
AVFLAASLGDLATYTVTSLQLALSFPAKTGGVMAAFAKFATIFSLTQIPLAIIEGLITIMIFEFMMKYSKEELKTLSEV

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 25630; Mature: 25630

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYLFLLTTALVLALSQSAYAMHIAEGFLPPKWAALYFVLSAPFIVIGVKHIRQKTKK
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
NKDLKMLLAVVAAYAFILSAMKIPSVTGSCSHPTGTGLAAIIFGPFVASVVGVIVLLFQA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ILLAHGGITTLGANTFSMGIVGPIVSYLIYKGLKNKNQKLAVFLAASLGDLATYTVTSLQ
HHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHH
LALSFPAKTGGVMAAFAKFATIFSLTQIPLAIIEGLITIMIFEFMMKYSKEELKTLSEV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKYLFLLTTALVLALSQSAYAMHIAEGFLPPKWAALYFVLSAPFIVIGVKHIRQKTKK
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
NKDLKMLLAVVAAYAFILSAMKIPSVTGSCSHPTGTGLAAIIFGPFVASVVGVIVLLFQA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ILLAHGGITTLGANTFSMGIVGPIVSYLIYKGLKNKNQKLAVFLAASLGDLATYTVTSLQ
HHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHH
LALSFPAKTGGVMAAFAKFATIFSLTQIPLAIIEGLITIMIFEFMMKYSKEELKTLSEV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]