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The map label for this gene is 226948183

Identifier: 226948183

GI number: 226948183

Start: 1108576

End: 1109457

Strand: Direct

Name: 226948183

Synonym: CLM_1057

Alternate gene names: NA

Gene position: 1108576-1109457 (Clockwise)

Preceding gene: 226948182

Following gene: 226948185

Centisome position: 26.68

GC content: 25.17

Gene sequence:

>882_bases
ATGAAAAATAAAAAACAAGAAAAAATATTACTTACAGTATTATTTTTAGTATTAATAGCTATTATAGTAATACCAACTTT
AAACAATGAATTAAAATTTTCTAAATTAGTTAAGGAAGCTAATGTATGTTTTGATAGTAAAAACTATAAACAAGCCAGTG
AATTATATGATGATGCACTAAGTCTTTCACCTATTTTTAAAGATACAGAAAGCGTTAGGACCAAATTATCTAAAGCCAAA
ATATTAAATGAATCTATTGATAATTTTAATAAAGGTATGAATTCTTATAAAAATAAAAATTATGAATCTGCAGTTTATTT
TTTGAATAAAGTACCAAAAGAAGATACTGAAAATTATAATGAAGCAATAAAAAAACTTAAGGAAAGTATACCACTTTATA
ATAATCAGATTATAGAAAAAGCAAATAAAGCAGCAGCAAATAATGATTTTTATAAAGCACTTATTGTAATAGATGAAGGT
TTAAAATATGATAATAATAATAAACAATTAATTAATTTAAAAAATAAATATGAAAAACAAAATAGTGATTTAGAAACAGC
TAAAATGGAAGCTAAAGCTAAAGCTGAAGAAGCAAAAAAAGAAGCTGAAGCTAGAGCAGAAGCTGAAAAATATAAAACCA
AGAAAATAACATCATCAGATAACTATAATGTTTGGCGTGTATATCTTAAAGAAGGGGAAAAGACGTTTAAAATCAATGTA
AAAGATGGAGAGGAAGACAATGTTATAGTTAAATTAGGAGATCATATTGTTATAAATGAAATAGGTATGGGTACTTATGC
AAACAGTGTAGAAGTGCCTAGTGATGGATGGTATAACTTGTCGGTTGAATGCTCTATGGGATACAGCTGGAATTTTGAAT
AA

Upstream 100 bases:

>100_bases
AATTTTAAAAAAATATACTAATTCTTATAATTTGAAGGATTTTATCCTTATTTGTAAAAATATATATAATATATATTCAA
TTTACAATTAGGAGGCATTT

Downstream 100 bases:

>100_bases
TTAATCTAAAAAAATAGATATATTTGTATATGAACTAATATATCTATTTTTTTGTGCAATGAACACTAGGAAAAGATGCC
TAGTGATTTTAAAAAAGGCT

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKNKKQEKILLTVLFLVLIAIIVIPTLNNELKFSKLVKEANVCFDSKNYKQASELYDDALSLSPIFKDTESVRTKLSKAK
ILNESIDNFNKGMNSYKNKNYESAVYFLNKVPKEDTENYNEAIKKLKESIPLYNNQIIEKANKAAANNDFYKALIVIDEG
LKYDNNNKQLINLKNKYEKQNSDLETAKMEAKAKAEEAKKEAEARAEAEKYKTKKITSSDNYNVWRVYLKEGEKTFKINV
KDGEEDNVIVKLGDHIVINEIGMGTYANSVEVPSDGWYNLSVECSMGYSWNFE

Sequences:

>Translated_293_residues
MKNKKQEKILLTVLFLVLIAIIVIPTLNNELKFSKLVKEANVCFDSKNYKQASELYDDALSLSPIFKDTESVRTKLSKAK
ILNESIDNFNKGMNSYKNKNYESAVYFLNKVPKEDTENYNEAIKKLKESIPLYNNQIIEKANKAAANNDFYKALIVIDEG
LKYDNNNKQLINLKNKYEKQNSDLETAKMEAKAKAEEAKKEAEARAEAEKYKTKKITSSDNYNVWRVYLKEGEKTFKINV
KDGEEDNVIVKLGDHIVINEIGMGTYANSVEVPSDGWYNLSVECSMGYSWNFE
>Mature_293_residues
MKNKKQEKILLTVLFLVLIAIIVIPTLNNELKFSKLVKEANVCFDSKNYKQASELYDDALSLSPIFKDTESVRTKLSKAK
ILNESIDNFNKGMNSYKNKNYESAVYFLNKVPKEDTENYNEAIKKLKESIPLYNNQIIEKANKAAANNDFYKALIVIDEG
LKYDNNNKQLINLKNKYEKQNSDLETAKMEAKAKAEEAKKEAEARAEAEKYKTKKITSSDNYNVWRVYLKEGEKTFKINV
KDGEEDNVIVKLGDHIVINEIGMGTYANSVEVPSDGWYNLSVECSMGYSWNFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33602; Mature: 33602

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKQEKILLTVLFLVLIAIIVIPTLNNELKFSKLVKEANVCFDSKNYKQASELYDDAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SLSPIFKDTESVRTKLSKAKILNESIDNFNKGMNSYKNKNYESAVYFLNKVPKEDTENYN
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHH
EAIKKLKESIPLYNNQIIEKANKAAANNDFYKALIVIDEGLKYDNNNKQLINLKNKYEKQ
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHC
NSDLETAKMEAKAKAEEAKKEAEARAEAEKYKTKKITSSDNYNVWRVYLKEGEKTFKINV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEE
KDGEEDNVIVKLGDHIVINEIGMGTYANSVEVPSDGWYNLSVECSMGYSWNFE
CCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKNKKQEKILLTVLFLVLIAIIVIPTLNNELKFSKLVKEANVCFDSKNYKQASELYDDAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SLSPIFKDTESVRTKLSKAKILNESIDNFNKGMNSYKNKNYESAVYFLNKVPKEDTENYN
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHH
EAIKKLKESIPLYNNQIIEKANKAAANNDFYKALIVIDEGLKYDNNNKQLINLKNKYEKQ
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHC
NSDLETAKMEAKAKAEEAKKEAEARAEAEKYKTKKITSSDNYNVWRVYLKEGEKTFKINV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEE
KDGEEDNVIVKLGDHIVINEIGMGTYANSVEVPSDGWYNLSVECSMGYSWNFE
CCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA