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The map label for this gene is aguA [H]

Identifier: 226948158

GI number: 226948158

Start: 1084781

End: 1086013

Strand: Reverse

Name: aguA [H]

Synonym: CLM_1030

Alternate gene names: 226948158

Gene position: 1086013-1084781 (Counterclockwise)

Preceding gene: 226948162

Following gene: 226948154

Centisome position: 26.14

GC content: 34.06

Gene sequence:

>1233_bases
ATGGAAATATATAGAACTGTGGGGGAATTTGAAAAACAAGAATCTGTAATGATTATATGGCCTCTAAGTGCTTATGCAAC
TAGCAAGCTAAATAATGATATTGTAAGTGTTCAAATAGTTCAGGCTCTCATTGAAGAAGTAAAAGTAATTATTTGTTGCT
TTGATAAGGATGTACAAAATCGTGCACAAAAAGTACTAACTAGCCAAGGTATTGATACAAACTTAATCGAATTTGTAATA
TTCCCTTCAAGCATTGTATATCCTCGTGATTTTGGGGCTGAAATAATGATAAGTAACAAAGGGAACCGTGCTAGAGTTGA
TTTTCGTTTTAACATGTATGGATACTCTTTTGAAGAAGATGAGCTTTCTCAGCTTTTATATGGTTTTAGTAAATTCCATG
CAGAAAGTGTTGGGATAAAAAATACAAGATACTGTAATCTAATTAGTGAAGGTGGAGATCATGAGTTTAATGGCGATGGC
ATTATGATGGCTATAAAAGAAACCGAGGTAGATAAACGTAATCCTAATAAAACTGTTGCTGAAGTAGAAAAAGAACTAAA
AGAAGTATTTAATTTAGACCAAATTATATGGCTTCCTCAATGCTCCTATGATGATGAGTACTCATATTGTGGACCAATTC
CATCTTATGATAATACATTTAACTCTTTTCGTTCAGCCTCTGCCAACGGACACATTGATGAAATCTGTAGGTTTGTTAGC
CAGGATACAATTTTAATGTCATACGTTTCTGATGAGGAAGCTTTAAATAGTAAGCTTCATGCCCTAAACAAAAAGCGATT
GGACAAAGGCTTTGAAGCTGTAAAAGCTGCTAAAAACTTTGATGGAAGGCCTTTCAAAATCCTTAAAATGCCTGTTCCTG
AACCAATATATGTTGATCTATATCCAAAGGATCATGCCTATAACCATTGGAGTGAAGCAAAAGAAGAGATGAATGGGGTA
TTTCTGGATGGGACACCATTCCCAGATGATCCTATAAACGTATTACCAGCACTAAGCTATTGCAACTTCTTAATTGCAAA
TAATGTAATTATTGCTCAAAAATATTACGAAGAAGGAATGCCAGAATTAATCAAAGAAAAAGATGAAGAAGCACTAAATG
TTTTAAAAACTGCTTTTCCAAATCATCGCATTGTGCAAATTAATACATTAGCACTTAACCTATACGGTGGAGGAATCCAT
TGCCATACAAGAAATATTCCAGTAGCACAATGA

Upstream 100 bases:

>100_bases
TCTATATAAATCCCCTCCTTGACTATTGAGTAACTCTATACTTTATAATGCATCTTAATTAGATAAATTGCAATAATAAA
ATTATAAAGGAGATATTAAT

Downstream 100 bases:

>100_bases
ATAATATAAAATAGGATAAACTTTCCCTTGTAAGATAGACACAGAAAAGAGTACGTGTACCTTACAGGGGATTTTTTATG
CTTAAAGTTAATGGAGTAGG

Product: peptidyl-arginine deiminase

Products: NA

Alternate protein names: Agmatine iminohydrolase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MEIYRTVGEFEKQESVMIIWPLSAYATSKLNNDIVSVQIVQALIEEVKVIICCFDKDVQNRAQKVLTSQGIDTNLIEFVI
FPSSIVYPRDFGAEIMISNKGNRARVDFRFNMYGYSFEEDELSQLLYGFSKFHAESVGIKNTRYCNLISEGGDHEFNGDG
IMMAIKETEVDKRNPNKTVAEVEKELKEVFNLDQIIWLPQCSYDDEYSYCGPIPSYDNTFNSFRSASANGHIDEICRFVS
QDTILMSYVSDEEALNSKLHALNKKRLDKGFEAVKAAKNFDGRPFKILKMPVPEPIYVDLYPKDHAYNHWSEAKEEMNGV
FLDGTPFPDDPINVLPALSYCNFLIANNVIIAQKYYEEGMPELIKEKDEEALNVLKTAFPNHRIVQINTLALNLYGGGIH
CHTRNIPVAQ

Sequences:

>Translated_410_residues
MEIYRTVGEFEKQESVMIIWPLSAYATSKLNNDIVSVQIVQALIEEVKVIICCFDKDVQNRAQKVLTSQGIDTNLIEFVI
FPSSIVYPRDFGAEIMISNKGNRARVDFRFNMYGYSFEEDELSQLLYGFSKFHAESVGIKNTRYCNLISEGGDHEFNGDG
IMMAIKETEVDKRNPNKTVAEVEKELKEVFNLDQIIWLPQCSYDDEYSYCGPIPSYDNTFNSFRSASANGHIDEICRFVS
QDTILMSYVSDEEALNSKLHALNKKRLDKGFEAVKAAKNFDGRPFKILKMPVPEPIYVDLYPKDHAYNHWSEAKEEMNGV
FLDGTPFPDDPINVLPALSYCNFLIANNVIIAQKYYEEGMPELIKEKDEEALNVLKTAFPNHRIVQINTLALNLYGGGIH
CHTRNIPVAQ
>Mature_410_residues
MEIYRTVGEFEKQESVMIIWPLSAYATSKLNNDIVSVQIVQALIEEVKVIICCFDKDVQNRAQKVLTSQGIDTNLIEFVI
FPSSIVYPRDFGAEIMISNKGNRARVDFRFNMYGYSFEEDELSQLLYGFSKFHAESVGIKNTRYCNLISEGGDHEFNGDG
IMMAIKETEVDKRNPNKTVAEVEKELKEVFNLDQIIWLPQCSYDDEYSYCGPIPSYDNTFNSFRSASANGHIDEICRFVS
QDTILMSYVSDEEALNSKLHALNKKRLDKGFEAVKAAKNFDGRPFKILKMPVPEPIYVDLYPKDHAYNHWSEAKEEMNGV
FLDGTPFPDDPINVLPALSYCNFLIANNVIIAQKYYEEGMPELIKEKDEEALNVLKTAFPNHRIVQINTLALNLYGGGIH
CHTRNIPVAQ

Specific function: Unknown

COG id: COG2957

COG function: function code E; Peptidylarginine deiminase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the agmatine deiminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017754
- InterPro:   IPR007466 [H]

Pfam domain/function: PF04371 PAD_porph [H]

EC number: =3.5.3.12 [H]

Molecular weight: Translated: 46749; Mature: 46749

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIYRTVGEFEKQESVMIIWPLSAYATSKLNNDIVSVQIVQALIEEVKVIICCFDKDVQN
CCHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCHHHH
RAQKVLTSQGIDTNLIEFVIFPSSIVYPRDFGAEIMISNKGNRARVDFRFNMYGYSFEED
HHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCEEEEECCCCEEEEEEEEEECCCCCCHH
ELSQLLYGFSKFHAESVGIKNTRYCNLISEGGDHEFNGDGIMMAIKETEVDKRNPNKTVA
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCEEEEEEEECCCCCCCCCHHHH
EVEKELKEVFNLDQIIWLPQCSYDDEYSYCGPIPSYDNTFNSFRSASANGHIDEICRFVS
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHC
QDTILMSYVSDEEALNSKLHALNKKRLDKGFEAVKAAKNFDGRPFKILKMPVPEPIYVDL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE
YPKDHAYNHWSEAKEEMNGVFLDGTPFPDDPINVLPALSYCNFLIANNVIIAQKYYEEGM
CCCCCCCCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHCCC
PELIKEKDEEALNVLKTAFPNHRIVQINTLALNLYGGGIHCHTRNIPVAQ
HHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEEEEECCCCCCC
>Mature Secondary Structure
MEIYRTVGEFEKQESVMIIWPLSAYATSKLNNDIVSVQIVQALIEEVKVIICCFDKDVQN
CCHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCHHHH
RAQKVLTSQGIDTNLIEFVIFPSSIVYPRDFGAEIMISNKGNRARVDFRFNMYGYSFEED
HHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCEEEEECCCCEEEEEEEEEECCCCCCHH
ELSQLLYGFSKFHAESVGIKNTRYCNLISEGGDHEFNGDGIMMAIKETEVDKRNPNKTVA
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCEEEEEEEECCCCCCCCCHHHH
EVEKELKEVFNLDQIIWLPQCSYDDEYSYCGPIPSYDNTFNSFRSASANGHIDEICRFVS
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHC
QDTILMSYVSDEEALNSKLHALNKKRLDKGFEAVKAAKNFDGRPFKILKMPVPEPIYVDL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE
YPKDHAYNHWSEAKEEMNGVFLDGTPFPDDPINVLPALSYCNFLIANNVIIAQKYYEEGM
CCCCCCCCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHCCC
PELIKEKDEEALNVLKTAFPNHRIVQINTLALNLYGGGIHCHTRNIPVAQ
HHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA