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The map label for this gene is yvaP [H]

Identifier: 226948132

GI number: 226948132

Start: 1057377

End: 1057685

Strand: Reverse

Name: yvaP [H]

Synonym: CLM_1000

Alternate gene names: 226948132

Gene position: 1057685-1057377 (Counterclockwise)

Preceding gene: 226948135

Following gene: 226948131

Centisome position: 25.45

GC content: 33.33

Gene sequence:

>309_bases
ATGGAAAAATATCACATGTGTCCAAAGTTTGAAAATGCTTTTGAACTATTAGGAAAAAGATGGACTGGATTAATTATAAG
AACATTATTAAATGGACAAAAGCGATTTTCTGATATAGCAGAAGCAATCCCCAATATGAGTGCTCGTATGCTCACTGAAA
GATTTAAAGAACTAGAGGAGGAAGGGATTATTATTAGAAAAGTTTATCCAGAAACTCCTGTGCGCATAGAGTACGAACTT
ACAGAAAAAGGTTTAGACTTACAAGCTGTTATGGATGAAATTCAAAAATGGGCAGAAAAATGGAACTAA

Upstream 100 bases:

>100_bases
ATAAATAAAACGACAACAAATCCTTATATTGGTATAATATAGTAAGCAACTTACTTTTGTCAAGTAAACATGATATACTA
GTACTAGGTGGTGATGGAAT

Downstream 100 bases:

>100_bases
ATAAGATTACATAAAGAACTTCCTATTGATTTAGGGAGTTTTTTATTTTTCATCTATAAAACATAAATCTAAAGTAACTT
TAAATAATTATTAAAAATTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEKYHMCPKFENAFELLGKRWTGLIIRTLLNGQKRFSDIAEAIPNMSARMLTERFKELEEEGIIIRKVYPETPVRIEYEL
TEKGLDLQAVMDEIQKWAEKWN

Sequences:

>Translated_102_residues
MEKYHMCPKFENAFELLGKRWTGLIIRTLLNGQKRFSDIAEAIPNMSARMLTERFKELEEEGIIIRKVYPETPVRIEYEL
TEKGLDLQAVMDEIQKWAEKWN
>Mature_102_residues
MEKYHMCPKFENAFELLGKRWTGLIIRTLLNGQKRFSDIAEAIPNMSARMLTERFKELEEEGIIIRKVYPETPVRIEYEL
TEKGLDLQAVMDEIQKWAEKWN

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12148; Mature: 12148

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYHMCPKFENAFELLGKRWTGLIIRTLLNGQKRFSDIAEAIPNMSARMLTERFKELEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EGIIIRKVYPETPVRIEYELTEKGLDLQAVMDEIQKWAEKWN
CCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKYHMCPKFENAFELLGKRWTGLIIRTLLNGQKRFSDIAEAIPNMSARMLTERFKELEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EGIIIRKVYPETPVRIEYELTEKGLDLQAVMDEIQKWAEKWN
CCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]