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The map label for this gene is yjcF [C]

Identifier: 226948123

GI number: 226948123

Start: 1049990

End: 1050643

Strand: Direct

Name: yjcF [C]

Synonym: CLM_0991

Alternate gene names: 226948123

Gene position: 1049990-1050643 (Clockwise)

Preceding gene: 226948122

Following gene: 226948128

Centisome position: 25.27

GC content: 32.72

Gene sequence:

>654_bases
ATGAGTATTATTAATCCACGAATTCCAGCAGATTTGATAAGGATAGAGGATTTTTCCACATATGCACAGCGATATTTATA
TGAGGAGATACCAATAACGCAGACAAAGATTTACGAAGAATATATTGAACATTTTGATTTTTACAAAAGCGAAATCAATA
CAAGCATTTTCGAAAACTGTACATTCCTTGATTGTAGTTTTGAAGGAGCAAGCTTTGTTGATGTTGTATTCCAAAATTGT
AATCTATCAAATAGTAATTTTACAGATGCATATTTCGAAAGGTGTAAGTTCGTTGATTGTAAATGTATAGGAGTAAATAT
GAGCAGCATTATTTTCAAGCAGATATCTATGCAAAGATCAAATTTTCAGTATTCCTATTTTGATAAAGCTAAGATGACAG
ATGTTGCTTTTCAGGATATAGATTTCACTGAGGTATCTATATCCGAAGCCAAATTGAAGAGGTTTGAAGCAAAAAACTCC
AACTTTATTAAAAACAACTTTTTTAAGACAATGTTGGCAGGTGTTGATTTTACAAAAAATGAGCTAGTTGCTCCGACGGT
ATCTTCACCTCCCATTGAATTTCAAGGAGCTAAAATTAGTATGGTTCAGGCGGCTGACTTAATTGGTCTTTGGGGAATCA
TTGTTGATCAGTAA

Upstream 100 bases:

>100_bases
AATTTTAAAAGAAGAATGGGGCAATGAGAAAGTAAAGAGCAACAATGGATAAAATGCGAGGTGAGTATATAATTTCTATT
GAAAGGAAGTTAATAAAGCT

Downstream 100 bases:

>100_bases
TTAAATATAATTTTCATTAGGAAACTAATAGGTTATGAGCAAAGCATTTAATCGATATAATTGAATACACTAAATAAAAT
ATGTCTTATGTAGAATCAGG

Product: pentapeptide repeat family protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; Pentapeptide Repeat Family Protein; Pentapeptide Repeats Protein; Pentapeptide Repeats Domain Protein; Quinolone Resistance Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSIINPRIPADLIRIEDFSTYAQRYLYEEIPITQTKIYEEYIEHFDFYKSEINTSIFENCTFLDCSFEGASFVDVVFQNC
NLSNSNFTDAYFERCKFVDCKCIGVNMSSIIFKQISMQRSNFQYSYFDKAKMTDVAFQDIDFTEVSISEAKLKRFEAKNS
NFIKNNFFKTMLAGVDFTKNELVAPTVSSPPIEFQGAKISMVQAADLIGLWGIIVDQ

Sequences:

>Translated_217_residues
MSIINPRIPADLIRIEDFSTYAQRYLYEEIPITQTKIYEEYIEHFDFYKSEINTSIFENCTFLDCSFEGASFVDVVFQNC
NLSNSNFTDAYFERCKFVDCKCIGVNMSSIIFKQISMQRSNFQYSYFDKAKMTDVAFQDIDFTEVSISEAKLKRFEAKNS
NFIKNNFFKTMLAGVDFTKNELVAPTVSSPPIEFQGAKISMVQAADLIGLWGIIVDQ
>Mature_216_residues
SIINPRIPADLIRIEDFSTYAQRYLYEEIPITQTKIYEEYIEHFDFYKSEINTSIFENCTFLDCSFEGASFVDVVFQNCN
LSNSNFTDAYFERCKFVDCKCIGVNMSSIIFKQISMQRSNFQYSYFDKAKMTDVAFQDIDFTEVSISEAKLKRFEAKNSN
FIKNNFFKTMLAGVDFTKNELVAPTVSSPPIEFQGAKISMVQAADLIGLWGIIVDQ

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25039; Mature: 24907

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIINPRIPADLIRIEDFSTYAQRYLYEEIPITQTKIYEEYIEHFDFYKSEINTSIFENC
CCCCCCCCCHHHEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCC
TFLDCSFEGASFVDVVFQNCNLSNSNFTDAYFERCKFVDCKCIGVNMSSIIFKQISMQRS
EEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHC
NFQYSYFDKAKMTDVAFQDIDFTEVSISEAKLKRFEAKNSNFIKNNFFKTMLAGVDFTKN
CCCEEEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
ELVAPTVSSPPIEFQGAKISMVQAADLIGLWGIIVDQ
CEECCCCCCCCCEECCCEEEEHHHHHHHHHHHEEECC
>Mature Secondary Structure 
SIINPRIPADLIRIEDFSTYAQRYLYEEIPITQTKIYEEYIEHFDFYKSEINTSIFENC
CCCCCCCCHHHEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCC
TFLDCSFEGASFVDVVFQNCNLSNSNFTDAYFERCKFVDCKCIGVNMSSIIFKQISMQRS
EEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHC
NFQYSYFDKAKMTDVAFQDIDFTEVSISEAKLKRFEAKNSNFIKNNFFKTMLAGVDFTKN
CCCEEEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
ELVAPTVSSPPIEFQGAKISMVQAADLIGLWGIIVDQ
CEECCCCCCCCCEECCCEEEEHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA