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The map label for this gene is 226948118

Identifier: 226948118

GI number: 226948118

Start: 1043747

End: 1044541

Strand: Reverse

Name: 226948118

Synonym: CLM_0983

Alternate gene names: NA

Gene position: 1044541-1043747 (Counterclockwise)

Preceding gene: 226948119

Following gene: 226948116

Centisome position: 25.14

GC content: 33.08

Gene sequence:

>795_bases
ATGAATAGAAATGAAAAAGCATTGATACATAAAGATATAAATGAAATACTAAGTTCAAGACGGGTTATTATTCCTATGAC
TATTGTACCGATTATTTTGATTGTAATCATACCCCTAGCAATATTGATAGGTGCGAACTATATTGGAAATGATTCAAGTA
TGTTTACAAAGATAGCTCCTCTTATAAAAAAATTGCCTTCTGAATATAAAACATATACTCCAGCCCAACTTTTAATAAAA
GTAACGCTAAACTTTATGTTTCCGTCATACTTTCTTATAATTCCAATAATGTGCTCAGGAGTTATTGGAGCCAGTAGTTT
TGTAGGAGAAAAGGAACATAAAACCCTAGAGTCTCTGCTTTACACACCAATATCCATGGAACAACTGCTTAGAGCCAAGA
TTTTAGGTGTTTTTGTGCCCTCTTACATGGTGACTTTGATTTCATTTATAGTATTTGGCATCATATTTAATGTAGGTGGT
TTTATCTATTTTGGAGGACTTATTTTCCCAGATGCAAAATGGCTTATAATCATACTTTGGATTTCACCTGCAATCAATTT
ATTATCGTTAATATTTACTGTGATGGTATCGTCAAAATCAGAAACCTTCCAAGAAGCACAGCAAGTAAGCGGCCTTCTTG
TCATTCCAGTGATTCTTATATTAGTAGCTCAAATGACAGGTGTACTTTTACTCAGCAAAGTCGTAATGTTTATAGGGGGT
GCTGTTCTCTTCGTACTTGATTATATGTTAATAAAGAGGATTTCCTCTAAGTTTGTTCCTGAGAAACTAATTTAA

Upstream 100 bases:

>100_bases
TGAGGCTGTACAGCAAAAATGGTCTTTGGAACAATTGTACTTTAAATATATAAAGGGTACATCTGATGATGTGAAATTAT
AGTTAAGGAGTAGTTAGAAT

Downstream 100 bases:

>100_bases
ATATCTACTATTAATCTTATTATATTATTATATGCGCTCTCTAAAAGAATTACAAATACTTGGCGGATATCAAGAACTGT
CAAAAATGTTTTTTCAAAAT

Product: putative ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter; Permease; ABC-2 Type Transporter; ABC-Type Transport System Permease Component; ABC Transporter Membrane-Spanning Subunit

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNRNEKALIHKDINEILSSRRVIIPMTIVPIILIVIIPLAILIGANYIGNDSSMFTKIAPLIKKLPSEYKTYTPAQLLIK
VTLNFMFPSYFLIIPIMCSGVIGASSFVGEKEHKTLESLLYTPISMEQLLRAKILGVFVPSYMVTLISFIVFGIIFNVGG
FIYFGGLIFPDAKWLIIILWISPAINLLSLIFTVMVSSKSETFQEAQQVSGLLVIPVILILVAQMTGVLLLSKVVMFIGG
AVLFVLDYMLIKRISSKFVPEKLI

Sequences:

>Translated_264_residues
MNRNEKALIHKDINEILSSRRVIIPMTIVPIILIVIIPLAILIGANYIGNDSSMFTKIAPLIKKLPSEYKTYTPAQLLIK
VTLNFMFPSYFLIIPIMCSGVIGASSFVGEKEHKTLESLLYTPISMEQLLRAKILGVFVPSYMVTLISFIVFGIIFNVGG
FIYFGGLIFPDAKWLIIILWISPAINLLSLIFTVMVSSKSETFQEAQQVSGLLVIPVILILVAQMTGVLLLSKVVMFIGG
AVLFVLDYMLIKRISSKFVPEKLI
>Mature_264_residues
MNRNEKALIHKDINEILSSRRVIIPMTIVPIILIVIIPLAILIGANYIGNDSSMFTKIAPLIKKLPSEYKTYTPAQLLIK
VTLNFMFPSYFLIIPIMCSGVIGASSFVGEKEHKTLESLLYTPISMEQLLRAKILGVFVPSYMVTLISFIVFGIIFNVGG
FIYFGGLIFPDAKWLIIILWISPAINLLSLIFTVMVSSKSETFQEAQQVSGLLVIPVILILVAQMTGVLLLSKVVMFIGG
AVLFVLDYMLIKRISSKFVPEKLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29373; Mature: 29373

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA