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The map label for this gene is yoaR [H]

Identifier: 226948098

GI number: 226948098

Start: 1023578

End: 1025140

Strand: Direct

Name: yoaR [H]

Synonym: CLM_0962

Alternate gene names: 226948098

Gene position: 1023578-1025140 (Clockwise)

Preceding gene: 226948097

Following gene: 226948099

Centisome position: 24.63

GC content: 30.77

Gene sequence:

>1563_bases
ATGGTAGAAAAAAGTAGTAAAAAATTTGACAGAAGGAAAATTATAATTAGTGTAATTATAACAGGTGTCATCTTATTAGG
AGTTATAGCTATATGTACAAGTTATATGCAAAGGTCTGTAAAAAAATATAGCACTTTATTTTATCCCGGAACCAGAATTG
AAAATGTAAATGTATCAGGAAAAACATTAGAAGAAGCTAAAAAGCTTTTAAAGGAGCAGTATGTAGACAAACTACCTTCT
AGAAAATTAGTAGTAAAGGCAGAAGGCAAGAAATATCCATTTGAATTTTCTAAGTTAAATGTGAAGTACAATTTGGACAA
AGCATTGGATGAAGCTTTTAACTATGGAAAAAAACTAAATATTCTTAGTCAGTATAAAATCATAGTAGATCCAGATGATA
AATGTATCAGTACAGGATTTTCTTACGATAAAGAAGTGGTGAAAAATTTTATAGATGGTATAGCTAAGGATGTTAACAAA
GATCCAATTAATGCAGCTGTAAGCAGTACATATGGAAAAGTTAGCTTGGTTAAACATAGAGCTGGAAAGAAATTAGATAG
TGATAAACTTCAAAAATACATAAACAATAGTATGAATGGGGACGCTAGTAAAGACGTTGAAGTCCAAGCTCCTATAGTAG
AAGTTAAACCTAAAGTAACTACAGATAAAATTTCATCTATAAATACTTTAATATCTACATTCCATACAGAGTATGGCGGT
ATATCTTCACAAGAGAGAGCTAACAATATTGAAATATGTGCTAAGAGTATAAATGGTACTGTATTAATGCCGGGAGAAAC
CTTTAGTTTTAATCAAGTAGTAGGAGAAAGAACAGAGCAAAGAGGGTATCAATCTGGGCCAGTCATAGTAGGAAATCAAG
TGGAATCAGGATTAGGTGGAGGAATTTGTCAGGTATCATCAACATTATATAATACTATTTTATTAAGCAACATAAAGTCT
ACGGAAAGAATGCATCATACGTTACCATCAAGTTATGTACCACTTGGAATGGATGCTACTGTAGATTGGGGAAATATAGA
TTATAAATTTAAAAATACTTTTTCATATCCTATTTATATTGAAGGAATTGCTGATGGAAGCAGCATAATATTTAATTTAT
ATTCTAATTCAGAATTGAAGAAAAGAACTTATTCTATTTGGAATGAAGTTTACAATACTATAAATGCTAATATGAAAACT
GAAGATGATCCTAATCTTCCAGAAGGAAAACAAGAGATTGTACAAAATGCATACACGGGATATAAAGTAAGAGTTTATAA
AAATATCTTAGAAAACGGCAAAGTAATAGGTAAGGAGCTTGTTTCTGATGATTTTTATAGACCAATAGAAGGATTAGCAA
AAGTAGGACCTAAAAAACCAGCGCCTAAACCGGTAGAACCGAAAAAAGATGATTCTAAACCAACTCCTAAACCAGAGGAA
CCGAAAAAAGATGATCCTAAAGCTAAGCCAAATGATACTAATGACAAAGATAAGGATAAAGAAAAAGATAAGGATAAGGA
TAAACCTACACAAGAAACTCCTAAAGAAGATACAAAAAAATAA

Upstream 100 bases:

>100_bases
AGTAAAGGTAAAATTATTTATGAGATAATACCGTTTTTCTTAATTTTTGTTTATACGAAATCTAGGTAATTAATAAGTGT
AAGTTGAAGAGGTGATGCTT

Downstream 100 bases:

>100_bases
CACAATAAAAAAATCTATAAATAGATAAGCATGTAGTGAGAATAGCTATATGTTGTTATTGTAAAATTACTATAGGATAT
TTTTGAACAAAAAATAGAAG

Product: vanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MVEKSSKKFDRRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPS
RKLVVKAEGKKYPFEFSKLNVKYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKNFIDGIAKDVNK
DPINAAVSSTYGKVSLVKHRAGKKLDSDKLQKYINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
ISSQERANNIEICAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKS
TERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKT
EDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVIGKELVSDDFYRPIEGLAKVGPKKPAPKPVEPKKDDSKPTPKPEE
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK

Sequences:

>Translated_520_residues
MVEKSSKKFDRRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPS
RKLVVKAEGKKYPFEFSKLNVKYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKNFIDGIAKDVNK
DPINAAVSSTYGKVSLVKHRAGKKLDSDKLQKYINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
ISSQERANNIEICAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKS
TERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKT
EDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVIGKELVSDDFYRPIEGLAKVGPKKPAPKPVEPKKDDSKPTPKPEE
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK
>Mature_520_residues
MVEKSSKKFDRRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPS
RKLVVKAEGKKYPFEFSKLNVKYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKNFIDGIAKDVNK
DPINAAVSSTYGKVSLVKHRAGKKLDSDKLQKYINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
ISSQERANNIEICAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKS
TERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKT
EDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVIGKELVSDDFYRPIEGLAKVGPKKPAPKPVEPKKDDSKPTPKPEE
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 58246; Mature: 58246

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKSSKKFDRRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCC
KTLEEAKKLLKEQYVDKLPSRKLVVKAEGKKYPFEFSKLNVKYNLDKALDEAFNYGKKLN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECHHHHHHHHHCCCCEEC
ILSQYKIIVDPDDKCISTGFSYDKEVVKNFIDGIAKDVNKDPINAAVSSTYGKVSLVKHR
EEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHH
AGKKLDSDKLQKYINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
CCCCCCHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCC
ISSQERANNIEICAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGG
CCCHHHCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
GICQVSSTLYNTILLSNIKSTERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEE
EGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKTEDDPNLPEGKQEIVQNAYTG
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
YKVRVYKNILENGKVIGKELVSDDFYRPIEGLAKVGPKKPAPKPVEPKKDDSKPTPKPEE
EEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MVEKSSKKFDRRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCC
KTLEEAKKLLKEQYVDKLPSRKLVVKAEGKKYPFEFSKLNVKYNLDKALDEAFNYGKKLN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECHHHHHHHHHCCCCEEC
ILSQYKIIVDPDDKCISTGFSYDKEVVKNFIDGIAKDVNKDPINAAVSSTYGKVSLVKHR
EEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHH
AGKKLDSDKLQKYINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
CCCCCCHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCC
ISSQERANNIEICAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGG
CCCHHHCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
GICQVSSTLYNTILLSNIKSTERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEE
EGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKTEDDPNLPEGKQEIVQNAYTG
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
YKVRVYKNILENGKVIGKELVSDDFYRPIEGLAKVGPKKPAPKPVEPKKDDSKPTPKPEE
EEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]