| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948055
Identifier: 226948055
GI number: 226948055
Start: 974259
End: 975395
Strand: Direct
Name: 226948055
Synonym: CLM_0916
Alternate gene names: NA
Gene position: 974259-975395 (Clockwise)
Preceding gene: 226948054
Following gene: 226948056
Centisome position: 23.45
GC content: 24.45
Gene sequence:
>1137_bases ATGACTAAATATATTTGGCAAGAACTTAAAAGAATATTAATTAAAAAGAAAATTTCACTTATTATTATTCTTATCGTTAC TATAGTTTTTGGTGGAATAAACGCTTTAAAACAAAAAACTTTGGAGGAAAAGCTTGAGCAGGCTAAAATTATTCTTAATA ATCAAATAAAATTTAAAGAAGATGAAAAAGCTATAAATGATACAAAACAAGAAATATCTGATATAGAAAAAACCTTAAGT AGCATAAAGAACTATGATAAATCAAAGATAGATGAAAAAATATTAAAATTAGAAAAAGAAAATAATCTCCAAAATGATTA TACAATAAGTTTATTAAAATATGAAAAAAAGAACAATATAGAAAAAAATCAAATAATGCCTAAAGGAATGTATGCAGCTA TTGATTTTCTAGCACAACCAACCGTAGCTATATTTTATATACTCATTCTAATTATACTTTTATCTGATATAATATCGGGG GAATATACTCCTAATACCATTAAAATGTCCCTTACTAAACCTATTTCAAGAAAAAAAATTATAATATCAAAGTTTGCTGT TTCTATAATTATAGGGGCAAGTGCCATAATTATAAGTACAATAATATTTATAATAGAGGCTGGAATTCATTTTGGACTTT CGGATTATAAAATGCCCTTTGATGTAGGTGCAAAGTATATTTTAAATAAATCACTACCTTTAACTGTAACAACCTCCCAA ATGGAACCTGTAAGAAATAGTATTTCGATAGTTCCTCTTTGGAGTGGAATTGTTAGATTTATGTTAATTGCTATACTTGT TTCAATAGCAACTATATCAATACTAATATTTATATCAACTCTTTGTAAAAAATCACTTATTTCATCTATTATAAATTTTA TATTAGTTATAGTAACATCACTTATATGTATTTGGGGGATTATGGATAATAATATTCTAGCTACTAAATATGGTGCTTTA TTAAAATTTACTCCTATTCTTTATATACTTGATATTTTTGAAGTTTTATCGGGAAATATTTCTGTAAGGCTTGCAAGCAG TATAAATATATTTTTTGTGTTAATTGTATGCTTAGTTTGGAGTTTAATTATGATGTTTTTAAGTACTTATATTTTTGCAA AGAGAGATTTTGATTAA
Upstream 100 bases:
>100_bases TTAATAGCCTTACATAATGAAGGAGTAAACGTAGAAGGTTTTTCTGAAGTAAAAGAAAAATTAGAGGATAAATTTATAAA AATAGTGGGGGATAATAATA
Downstream 100 bases:
>100_bases AATCATATAAAGTTAGACATACACTAGGTACAAAAGTATCTAGTGTTTTTTTATAGATGTATAGTTTAAGTCATATAAAA TAAAAATGGAGATTTTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTKYIWQELKRILIKKKISLIIILIVTIVFGGINALKQKTLEEKLEQAKIILNNQIKFKEDEKAINDTKQEISDIEKTLS SIKNYDKSKIDEKILKLEKENNLQNDYTISLLKYEKKNNIEKNQIMPKGMYAAIDFLAQPTVAIFYILILIILLSDIISG EYTPNTIKMSLTKPISRKKIIISKFAVSIIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDVGAKYILNKSLPLTVTTSQ MEPVRNSISIVPLWSGIVRFMLIAILVSIATISILIFISTLCKKSLISSIINFILVIVTSLICIWGIMDNNILATKYGAL LKFTPILYILDIFEVLSGNISVRLASSINIFFVLIVCLVWSLIMMFLSTYIFAKRDFD
Sequences:
>Translated_378_residues MTKYIWQELKRILIKKKISLIIILIVTIVFGGINALKQKTLEEKLEQAKIILNNQIKFKEDEKAINDTKQEISDIEKTLS SIKNYDKSKIDEKILKLEKENNLQNDYTISLLKYEKKNNIEKNQIMPKGMYAAIDFLAQPTVAIFYILILIILLSDIISG EYTPNTIKMSLTKPISRKKIIISKFAVSIIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDVGAKYILNKSLPLTVTTSQ MEPVRNSISIVPLWSGIVRFMLIAILVSIATISILIFISTLCKKSLISSIINFILVIVTSLICIWGIMDNNILATKYGAL LKFTPILYILDIFEVLSGNISVRLASSINIFFVLIVCLVWSLIMMFLSTYIFAKRDFD >Mature_377_residues TKYIWQELKRILIKKKISLIIILIVTIVFGGINALKQKTLEEKLEQAKIILNNQIKFKEDEKAINDTKQEISDIEKTLSS IKNYDKSKIDEKILKLEKENNLQNDYTISLLKYEKKNNIEKNQIMPKGMYAAIDFLAQPTVAIFYILILIILLSDIISGE YTPNTIKMSLTKPISRKKIIISKFAVSIIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDVGAKYILNKSLPLTVTTSQM EPVRNSISIVPLWSGIVRFMLIAILVSIATISILIFISTLCKKSLISSIINFILVIVTSLICIWGIMDNNILATKYGALL KFTPILYILDIFEVLSGNISVRLASSINIFFVLIVCLVWSLIMMFLSTYIFAKRDFD
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42836; Mature: 42705
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYIWQELKRILIKKKISLIIILIVTIVFGGINALKQKTLEEKLEQAKIILNNQIKFKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCH DEKAINDTKQEISDIEKTLSSIKNYDKSKIDEKILKLEKENNLQNDYTISLLKYEKKNNI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCC EKNQIMPKGMYAAIDFLAQPTVAIFYILILIILLSDIISGEYTPNTIKMSLTKPISRKKI CHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH IISKFAVSIIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDVGAKYILNKSLPLTVTTSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCCCCEEEECCH MEPVRNSISIVPLWSGIVRFMLIAILVSIATISILIFISTLCKKSLISSIINFILVIVTS HHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LICIWGIMDNNILATKYGALLKFTPILYILDIFEVLSGNISVRLASSINIFFVLIVCLVW HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH SLIMMFLSTYIFAKRDFD HHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKYIWQELKRILIKKKISLIIILIVTIVFGGINALKQKTLEEKLEQAKIILNNQIKFKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCH DEKAINDTKQEISDIEKTLSSIKNYDKSKIDEKILKLEKENNLQNDYTISLLKYEKKNNI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCC EKNQIMPKGMYAAIDFLAQPTVAIFYILILIILLSDIISGEYTPNTIKMSLTKPISRKKI CHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH IISKFAVSIIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDVGAKYILNKSLPLTVTTSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCCCCEEEECCH MEPVRNSISIVPLWSGIVRFMLIAILVSIATISILIFISTLCKKSLISSIINFILVIVTS HHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LICIWGIMDNNILATKYGALLKFTPILYILDIFEVLSGNISVRLASSINIFFVLIVCLVW HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH SLIMMFLSTYIFAKRDFD HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA