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The map label for this gene is botR

Identifier: 226948033

GI number: 226948033

Start: 950593

End: 951129

Strand: Reverse

Name: botR

Synonym: CLM_0894

Alternate gene names: NA

Gene position: 951129-950593 (Counterclockwise)

Preceding gene: 226948043

Following gene: 226948032

Centisome position: 22.89

GC content: 18.25

Gene sequence:

>537_bases
ATGAAAAACTTATTTTTTCTGATGAACACATTAAAAGATGATAATAAAAAATTTGAAGACATTTATATGAACTATAAAGA
TCTTATAGATATATTTATTAAAAAATATAACTTATCTGAGAATTACAATGATATACTAAAACATTTTTGGATTATTCTAA
TAAAAGCTGATTTAAATAAATTTAACACCGAAAATGATTTAAATAAATATATTAGTAAATGTTTAAAAAGATATTGTTTA
TCTATTTGTATGAAAAAGAATAGAGACAAAAAAATTATATACAATTCAGAAATTACAGATATAAATTTAAATTTAATACA
GGATAGTTGCTTTAATGATATAGAATTTGAATTTAAAGATTTAATATCTATATTACCTAACACTCAACAAAATATTATAT
ATATGAAATTTTTTAAAGATATGAAAGATATTGACATAGCTAAAAAACTCAAGATAAGCCGCCAATCTGTATATAAAAAT
AAAAATTTAGCATTAGAAAAGCTAAAGCCTATATTAAAAGAACTTATTAATATATAA

Upstream 100 bases:

>100_bases
AATAAAATATTAATATCTGGTTGCTTTTTTCGCGGAGTATAATATAGCCATATAAGTATAATATAACCTTAAATATTTAA
AAGTAGATGAGGTGGTAATA

Downstream 100 bases:

>100_bases
TTTATATTTTAGGTTTACAAAAAATAATATAGAGATGTTAATATATATATAAACAGTTGTGTTAAGTAATTATGAAAAAG
TAGTTTGAAAAATAAGTAGA

Product: transcriptional regulator BotR, P-21

Products: NA

Alternate protein names: Transcriptional Regulator BotR; Transcriptional Activator TetR

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKNLFFLMNTLKDDNKKFEDIYMNYKDLIDIFIKKYNLSENYNDILKHFWIILIKADLNKFNTENDLNKYISKCLKRYCL
SICMKKNRDKKIIYNSEITDINLNLIQDSCFNDIEFEFKDLISILPNTQQNIIYMKFFKDMKDIDIAKKLKISRQSVYKN
KNLALEKLKPILKELINI

Sequences:

>Translated_178_residues
MKNLFFLMNTLKDDNKKFEDIYMNYKDLIDIFIKKYNLSENYNDILKHFWIILIKADLNKFNTENDLNKYISKCLKRYCL
SICMKKNRDKKIIYNSEITDINLNLIQDSCFNDIEFEFKDLISILPNTQQNIIYMKFFKDMKDIDIAKKLKISRQSVYKN
KNLALEKLKPILKELINI
>Mature_178_residues
MKNLFFLMNTLKDDNKKFEDIYMNYKDLIDIFIKKYNLSENYNDILKHFWIILIKADLNKFNTENDLNKYISKCLKRYCL
SICMKKNRDKKIIYNSEITDINLNLIQDSCFNDIEFEFKDLISILPNTQQNIIYMKFFKDMKDIDIAKKLKISRQSVYKN
KNLALEKLKPILKELINI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21524; Mature: 21524

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLFFLMNTLKDDNKKFEDIYMNYKDLIDIFIKKYNLSENYNDILKHFWIILIKADLNK
CCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FNTENDLNKYISKCLKRYCLSICMKKNRDKKIIYNSEITDINLNLIQDSCFNDIEFEFKD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHHCCCCCCCHHHHH
LISILPNTQQNIIYMKFFKDMKDIDIAKKLKISRQSVYKNKNLALEKLKPILKELINI
HHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLFFLMNTLKDDNKKFEDIYMNYKDLIDIFIKKYNLSENYNDILKHFWIILIKADLNK
CCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FNTENDLNKYISKCLKRYCLSICMKKNRDKKIIYNSEITDINLNLIQDSCFNDIEFEFKD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHHCCCCCCCHHHHH
LISILPNTQQNIIYMKFFKDMKDIDIAKKLKISRQSVYKNKNLALEKLKPILKELINI
HHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA