| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948031
Identifier: 226948031
GI number: 226948031
Start: 946673
End: 948925
Strand: Reverse
Name: 226948031
Synonym: CLM_0892
Alternate gene names: NA
Gene position: 948925-946673 (Counterclockwise)
Preceding gene: 226948032
Following gene: 226948030
Centisome position: 22.84
GC content: 28.72
Gene sequence:
>2253_bases ATGAATAATTTAAAACCATTTATATATTACGATTGGAAAAAAACAATTTTAAAAAATGCAAAAGAAAGCTATTCTATAAA TGAAATTATACCTAAAACTTTTTTTATGGAACTTCATGGAACCAAAATCACTAATTCCACACTAAATGGTACTTGGAAAG CTTGGAACTTAACAGATGAAGGTGAAGGATCTCATCCAGTCTTAAAATGTATAATTGATGATGGATACTTAGATATGAAT TTTGGAGCTTCTTCTGAAAAAATTCCTTTAAAAAATGTTTGGATAAAACTTTGTATGAAAATCAATCCTAACTCAGATGG CACTTATTCAATACCTGAAAAGAGTTCATCATTCTATATTAAAGATAATTCCTTAAAAATTTCAAAAGATAATTTAATTT TAGATAAATATTTAAATAAATTAATGCTTTCATATTTTAAAAATAATATAAAAAATATTGAAATGTTTATTAATAAATCT AGAATTCAAACTAAAGTAGTAGGAGATTTAAGCTTATTAGGATGGAATACTGAGAATTCAGTATCATTTAGGACTATGAA TGAATTTATTAAAAAAGATAATCTGTACCCAAAAGATTTCAAAGCAGTATATAGTTATAGAAAAATGACATTTACAGCAA CAGGAACATTTGATAGTTGGGAAATGACCACAGGTGCAGATGGACGAAATATCAGATTCAAATGTCCGATTAAATCTGCA GCCTATGATCTTGATGGTGATGTATTTAATTCATCTACAGAAAATTTCTTGTTAATTCAAGTAGATCTAACATATTTTGA CTCTAAAACAACTATTAATGATCCTACTGGAGAAAATGACGGAAAACAATTCAATCTAAAAGTAAAAACAAATGATGATA AACTTAAAAATGTTTTAATAGTTACTTACAATCTAACTGATACTGATGGTTCAATGAGTTCAGAAGATAAAGATTTTTTA AGTTTAGCTTTTAGAAATTGGTTTAACGATAATATACAACAATTTGAACAGATATTTGCATATATACTTTTAGATGAAAC TGCTAAGATTCCAGAATATCAATGGTTAAAGCCTACTCAAATATCTTATGGATCAGCAAGTGTAGAAACTGCTAATGATG AACCTGACTTAGATGCAAGCATTTTTTCAGCAATGTCCATGGTAGAAAATAATACTAATTCTACTCCAAGCCATGCGGTA GATAATAGAATGTTACAATTAACAAAAACTCAAGCAGCTTTTGGTATTAGTTTTCCTTTATTTATAGAACATTTTTTAAA ACAAGCATTATTAAGTTCACAGTTTATTTCTGTAGATGATATAGTAGCTGACATAAACACTCTAACTATTACTAATAACA AACAAATAATATTCGGGAAAGTGGAAAATTCTGATGGTAAAAATGTTGATTCATCCCTTAAGCCTGGAAAATTGAAATTA TCACTTCAAAATAATTTAATTGTTTTAGAATTGTTTGACTTAACATGGGAACAAGGAAGAGGTGTAACAGGTCATTTTGA TTTTCGTCAAGAATATGAATTGACATTAGAATCAAAATCTGAAAAGCAAATTCCAATACTTAAAGTTCATGATGAACCTG AAATAGAATATTATGTAGAAGAAGCTCAATGGAAAGCTAATGAAGACATGATAGTTTCAGCTGTAGTAGGCACTGTCTTT AGTATGATATTAGGAGCAGGTATGAAGTTAGCTGGTTCTGCATTATCTAAGGCTGGTAAACTTATACGTTCAAAAGCAAC AACAATTAAAGGTAGAAAGAAAATTTATATTAATAGATCAAATGTAAGACAGCTAAGAAAGGATTCAGGAGTAACTGAGA TGGAACTTCAAAGAATAAATAGAAGAAATTCTAGCATTGCTTCTGAAGATGCTAGATTTATCTCAAATAATGGGACCACT AGTATACAAACTTTAGGAGATATGAAAAAGAAACCAATGTCAACTGGTCAAAGAATTGCTATAGGTGTTAAGAAGATAAC TGGTACCGCTGTAATGTTTGGTGCAGTAGGTTTAGGAATGAATTTTGGTGAAATGCTTATAAACTATATTAATGCTATGG AAAATAATGATTATAGCGCTATACCGGGAATTAATTCATTTATGCAACAATGTATTGGTGCTATGCAATGGCCTGATAAA GATAGTGAGCTTAAGGTAACATTTGGTAAACTTCAAGGAATTTATTTATTAGGTGGAACATTAGAAAAAAACAATAAGCC TAACAGCAAATAA
Upstream 100 bases:
>100_bases AATGGAATTTTAGAAGAAATAATATTAAATAGATTGTTATTGTCTATTTTATTAGGAAATGAAGAAAATTTATTGCAAAT CGCATAAGGGAGGAATATCA
Downstream 100 bases:
>100_bases AATATAAAAATATTTGATCTAAGGAGGAACTGAAACTAATGCAAACAACAACTTTAAATTGGGATACCGTATATGCAGTT CCAATAGATATTGTTAATGA
Product: toxin complex component ORF-X2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MNNLKPFIYYDWKKTILKNAKESYSINEIIPKTFFMELHGTKITNSTLNGTWKAWNLTDEGEGSHPVLKCIIDDGYLDMN FGASSEKIPLKNVWIKLCMKINPNSDGTYSIPEKSSSFYIKDNSLKISKDNLILDKYLNKLMLSYFKNNIKNIEMFINKS RIQTKVVGDLSLLGWNTENSVSFRTMNEFIKKDNLYPKDFKAVYSYRKMTFTATGTFDSWEMTTGADGRNIRFKCPIKSA AYDLDGDVFNSSTENFLLIQVDLTYFDSKTTINDPTGENDGKQFNLKVKTNDDKLKNVLIVTYNLTDTDGSMSSEDKDFL SLAFRNWFNDNIQQFEQIFAYILLDETAKIPEYQWLKPTQISYGSASVETANDEPDLDASIFSAMSMVENNTNSTPSHAV DNRMLQLTKTQAAFGISFPLFIEHFLKQALLSSQFISVDDIVADINTLTITNNKQIIFGKVENSDGKNVDSSLKPGKLKL SLQNNLIVLELFDLTWEQGRGVTGHFDFRQEYELTLESKSEKQIPILKVHDEPEIEYYVEEAQWKANEDMIVSAVVGTVF SMILGAGMKLAGSALSKAGKLIRSKATTIKGRKKIYINRSNVRQLRKDSGVTEMELQRINRRNSSIASEDARFISNNGTT SIQTLGDMKKKPMSTGQRIAIGVKKITGTAVMFGAVGLGMNFGEMLINYINAMENNDYSAIPGINSFMQQCIGAMQWPDK DSELKVTFGKLQGIYLLGGTLEKNNKPNSK
Sequences:
>Translated_750_residues MNNLKPFIYYDWKKTILKNAKESYSINEIIPKTFFMELHGTKITNSTLNGTWKAWNLTDEGEGSHPVLKCIIDDGYLDMN FGASSEKIPLKNVWIKLCMKINPNSDGTYSIPEKSSSFYIKDNSLKISKDNLILDKYLNKLMLSYFKNNIKNIEMFINKS RIQTKVVGDLSLLGWNTENSVSFRTMNEFIKKDNLYPKDFKAVYSYRKMTFTATGTFDSWEMTTGADGRNIRFKCPIKSA AYDLDGDVFNSSTENFLLIQVDLTYFDSKTTINDPTGENDGKQFNLKVKTNDDKLKNVLIVTYNLTDTDGSMSSEDKDFL SLAFRNWFNDNIQQFEQIFAYILLDETAKIPEYQWLKPTQISYGSASVETANDEPDLDASIFSAMSMVENNTNSTPSHAV DNRMLQLTKTQAAFGISFPLFIEHFLKQALLSSQFISVDDIVADINTLTITNNKQIIFGKVENSDGKNVDSSLKPGKLKL SLQNNLIVLELFDLTWEQGRGVTGHFDFRQEYELTLESKSEKQIPILKVHDEPEIEYYVEEAQWKANEDMIVSAVVGTVF SMILGAGMKLAGSALSKAGKLIRSKATTIKGRKKIYINRSNVRQLRKDSGVTEMELQRINRRNSSIASEDARFISNNGTT SIQTLGDMKKKPMSTGQRIAIGVKKITGTAVMFGAVGLGMNFGEMLINYINAMENNDYSAIPGINSFMQQCIGAMQWPDK DSELKVTFGKLQGIYLLGGTLEKNNKPNSK >Mature_750_residues MNNLKPFIYYDWKKTILKNAKESYSINEIIPKTFFMELHGTKITNSTLNGTWKAWNLTDEGEGSHPVLKCIIDDGYLDMN FGASSEKIPLKNVWIKLCMKINPNSDGTYSIPEKSSSFYIKDNSLKISKDNLILDKYLNKLMLSYFKNNIKNIEMFINKS RIQTKVVGDLSLLGWNTENSVSFRTMNEFIKKDNLYPKDFKAVYSYRKMTFTATGTFDSWEMTTGADGRNIRFKCPIKSA AYDLDGDVFNSSTENFLLIQVDLTYFDSKTTINDPTGENDGKQFNLKVKTNDDKLKNVLIVTYNLTDTDGSMSSEDKDFL SLAFRNWFNDNIQQFEQIFAYILLDETAKIPEYQWLKPTQISYGSASVETANDEPDLDASIFSAMSMVENNTNSTPSHAV DNRMLQLTKTQAAFGISFPLFIEHFLKQALLSSQFISVDDIVADINTLTITNNKQIIFGKVENSDGKNVDSSLKPGKLKL SLQNNLIVLELFDLTWEQGRGVTGHFDFRQEYELTLESKSEKQIPILKVHDEPEIEYYVEEAQWKANEDMIVSAVVGTVF SMILGAGMKLAGSALSKAGKLIRSKATTIKGRKKIYINRSNVRQLRKDSGVTEMELQRINRRNSSIASEDARFISNNGTT SIQTLGDMKKKPMSTGQRIAIGVKKITGTAVMFGAVGLGMNFGEMLINYINAMENNDYSAIPGINSFMQQCIGAMQWPDK DSELKVTFGKLQGIYLLGGTLEKNNKPNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84663; Mature: 84663
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLKPFIYYDWKKTILKNAKESYSINEIIPKTFFMELHGTKITNSTLNGTWKAWNLTDE CCCCCCCEEECHHHHHHHCCHHCCCHHHHCCCEEEEEECCCEEECCCCCCEEEEEECCCC GEGSHPVLKCIIDDGYLDMNFGASSEKIPLKNVWIKLCMKINPNSDGTYSIPEKSSSFYI CCCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHEEEEEEECCCCCCCEECCCCCCEEEE KDNSLKISKDNLILDKYLNKLMLSYFKNNIKNIEMFINKSRIQTKVVGDLSLLGWNTENS ECCCEEEECCCEEHHHHHHHHHHHHHHCCCCEEEEEEEHHHHEEEEEECEEEEECCCCCC VSFRTMNEFIKKDNLYPKDFKAVYSYRKMTFTATGTFDSWEMTTGADGRNIRFKCPIKSA EEHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEECCCCCCEEECCCCCCEEEEECCCCCC AYDLDGDVFNSSTENFLLIQVDLTYFDSKTTINDPTGENDGKQFNLKVKTNDDKLKNVLI CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEE VTYNLTDTDGSMSSEDKDFLSLAFRNWFNDNIQQFEQIFAYILLDETAKIPEYQWLKPTQ EEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE ISYGSASVETANDEPDLDASIFSAMSMVENNTNSTPSHAVDNRMLQLTKTQAAFGISFPL ECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEHHHHHCCCHHH FIEHFLKQALLSSQFISVDDIVADINTLTITNNKQIIFGKVENSDGKNVDSSLKPGKLKL HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEE SLQNNLIVLELFDLTWEQGRGVTGHFDFRQEYELTLESKSEKQIPILKVHDEPEIEYYVE EECCCEEEEEEEECCHHHCCCCEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEE EAQWKANEDMIVSAVVGTVFSMILGAGMKLAGSALSKAGKLIRSKATTIKGRKKIYINRS CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHH NVRQLRKDSGVTEMELQRINRRNSSIASEDARFISNNGTTSIQTLGDMKKKPMSTGQRIA HHHHHHHHCCCHHHHHHHHHHCCCCCHHCCHHEECCCCCEEHHHHHHHHCCCCCCCCEEE IGVKKITGTAVMFGAVGLGMNFGEMLINYINAMENNDYSAIPGINSFMQQCIGAMQWPDK EEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC DSELKVTFGKLQGIYLLGGTLEKNNKPNSK CCCEEEEEECCCEEEEECCEEECCCCCCCC >Mature Secondary Structure MNNLKPFIYYDWKKTILKNAKESYSINEIIPKTFFMELHGTKITNSTLNGTWKAWNLTDE CCCCCCCEEECHHHHHHHCCHHCCCHHHHCCCEEEEEECCCEEECCCCCCEEEEEECCCC GEGSHPVLKCIIDDGYLDMNFGASSEKIPLKNVWIKLCMKINPNSDGTYSIPEKSSSFYI CCCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHEEEEEEECCCCCCCEECCCCCCEEEE KDNSLKISKDNLILDKYLNKLMLSYFKNNIKNIEMFINKSRIQTKVVGDLSLLGWNTENS ECCCEEEECCCEEHHHHHHHHHHHHHHCCCCEEEEEEEHHHHEEEEEECEEEEECCCCCC VSFRTMNEFIKKDNLYPKDFKAVYSYRKMTFTATGTFDSWEMTTGADGRNIRFKCPIKSA EEHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEECCCCCCEEECCCCCCEEEEECCCCCC AYDLDGDVFNSSTENFLLIQVDLTYFDSKTTINDPTGENDGKQFNLKVKTNDDKLKNVLI CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEE VTYNLTDTDGSMSSEDKDFLSLAFRNWFNDNIQQFEQIFAYILLDETAKIPEYQWLKPTQ EEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE ISYGSASVETANDEPDLDASIFSAMSMVENNTNSTPSHAVDNRMLQLTKTQAAFGISFPL ECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEHHHHHCCCHHH FIEHFLKQALLSSQFISVDDIVADINTLTITNNKQIIFGKVENSDGKNVDSSLKPGKLKL HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEE SLQNNLIVLELFDLTWEQGRGVTGHFDFRQEYELTLESKSEKQIPILKVHDEPEIEYYVE EECCCEEEEEEEECCHHHCCCCEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEE EAQWKANEDMIVSAVVGTVFSMILGAGMKLAGSALSKAGKLIRSKATTIKGRKKIYINRS CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHH NVRQLRKDSGVTEMELQRINRRNSSIASEDARFISNNGTTSIQTLGDMKKKPMSTGQRIA HHHHHHHHCCCHHHHHHHHHHCCCCCHHCCHHEECCCCCEEHHHHHHHHCCCCCCCCEEE IGVKKITGTAVMFGAVGLGMNFGEMLINYINAMENNDYSAIPGINSFMQQCIGAMQWPDK EEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC DSELKVTFGKLQGIYLLGGTLEKNNKPNSK CCCEEEEEECCCEEEEECCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA