Click here to switch to the map view.

The map label for this gene is 226948015

Identifier: 226948015

GI number: 226948015

Start: 936862

End: 937194

Strand: Reverse

Name: 226948015

Synonym: CLM_0876

Alternate gene names: NA

Gene position: 937194-936862 (Counterclockwise)

Preceding gene: 226948016

Following gene: 226948009

Centisome position: 22.55

GC content: 24.32

Gene sequence:

>333_bases
ATGAGTATCAAAAAATCTATAGACGACTTAGGAAAACTATTTGGTAAAACTATTTTAGAAAATGATAAAAATATTGATAC
CGAAAAAATTGGTTCAACAGATTTATTTAAAATAATTTTAAATAAATTATTTTATGAAGGCAATTATGATAAGGCAGAAG
ATTTAATCTTTGAGGAATTAGAAAAAAATGATTCACCTGAAGTATATGAAATAGCCGTGGAATTCTACAATGCATTGCTT
AAAAAAAGTGATGAAGAATTGAATGAAGGTAACTTTTCAAGAGAGGAAATTTATCAAGGATTAGATGATATAAAAAGATT
TAAAACTAACTAA

Upstream 100 bases:

>100_bases
AACTAGATCTTAGTTTCTTGATTAAATAATAAAGAGAATTTACACAAATAATAAACATAAATTGTCAATATCATTAATAA
AAAAATTAAGGTGGAATATT

Downstream 100 bases:

>100_bases
TTTATAGATCTAATGAATTTAAAGATTGTTTGTGTTAATGAATTGCACTCAAAATGTTAGATTAAAATAACTAGCATTTT
GAGTGCAATTCTATAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSIKKSIDDLGKLFGKTILENDKNIDTEKIGSTDLFKIILNKLFYEGNYDKAEDLIFEELEKNDSPEVYEIAVEFYNALL
KKSDEELNEGNFSREEIYQGLDDIKRFKTN

Sequences:

>Translated_110_residues
MSIKKSIDDLGKLFGKTILENDKNIDTEKIGSTDLFKIILNKLFYEGNYDKAEDLIFEELEKNDSPEVYEIAVEFYNALL
KKSDEELNEGNFSREEIYQGLDDIKRFKTN
>Mature_109_residues
SIKKSIDDLGKLFGKTILENDKNIDTEKIGSTDLFKIILNKLFYEGNYDKAEDLIFEELEKNDSPEVYEIAVEFYNALLK
KSDEELNEGNFSREEIYQGLDDIKRFKTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12841; Mature: 12709

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKKSIDDLGKLFGKTILENDKNIDTEKIGSTDLFKIILNKLFYEGNYDKAEDLIFEEL
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EKNDSPEVYEIAVEFYNALLKKSDEELNEGNFSREEIYQGLDDIKRFKTN
HCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIKKSIDDLGKLFGKTILENDKNIDTEKIGSTDLFKIILNKLFYEGNYDKAEDLIFEEL
CHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EKNDSPEVYEIAVEFYNALLKKSDEELNEGNFSREEIYQGLDDIKRFKTN
HCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA