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The map label for this gene is yfmM [H]

Identifier: 226947999

GI number: 226947999

Start: 920005

End: 921558

Strand: Direct

Name: yfmM [H]

Synonym: CLM_0860

Alternate gene names: 226947999

Gene position: 920005-921558 (Clockwise)

Preceding gene: 226947997

Following gene: 226948000

Centisome position: 22.14

GC content: 28.83

Gene sequence:

>1554_bases
ATGAGCATTTTAACAGTTGAAAGCATGAGTCATTCATTTGGAGATAGAATATTATTTAAAAATGTATCCTTTAGATTATT
AAAAGGAGAGCATATTGGTCTTGTTGGAGCTAATGGTGAAGGTAAGTCCACCTTTATGAAAATTATTACAAATGAAATTT
TAGTTGATGAAGGAACTATTGATTGGAATAGTAAATTTAGCATTGGATATATGGATCAATTGGTTGAATTAAAAGAAGGA
ATTACTGTATTCAATTTTTTAAAAAAGGCATTTATAAAGTTATTTGATATAGAGAATAAAATTAATGATTTATATAATAA
TCTTGGCAATATGGATAAAGCGAGAATGGATAAAACGTTAAACCAAATTGCAACCATGCAGGAGATTTTAGAGAAGAATG
ATTTTTACAGTATTAACTCTAAAATACAAGCAACTGTAGTTGGACTTGGAATTAAAGAGCTTTTAGATAGGGATGTTTCA
GCTTTAAGTGGAGGACAAAGAACTAAAATTTTACTTGCAAAACTACTTTTAGAGAAACCAGATATTTTACTACTAGATGA
GCCAACTAACTATTTAGATGAAGAACACATAGAATGGCTTAAAAGTTATTTAATAAATTATGAAGGTGCATTTATATTAA
TATCACATGATAATGGCTTTTTAAATAGTGTAGTAAATGTGATTTATCATCTTGAGCACAAAACCTTAACAAGATATGCA
GGAAACTATGATTATTTTCTTAAGATTTATGAAGTACGAAAAGAGCAGAGGTTAATTCAATATAAAGAGCAGCAAAACGA
GATTGCAAAGCTTGAAGATTATATAAGAAAAAATAAGGCAAGAGCTTCGACTGCAAAACAAGCTAAATCAAGAGAAAAAA
AGCTTGATAAAATTGAAAAAATAGAAATCAAAAAAGAAATCATAAAACCATATTTTAATTTTAAAAGTGTGAGAATGCCA
GAAAATATAATTTTCAATGCCAGTAATTTAATTATTGGATATAACAAACCATTAAGCAAACCTCTAAATTTAAAAATGAA
AAGAGGACAAAAAATTGCAATAACAGGTGCTAATGGAATAGGTAAAACTACTTTAATAAAAACTTTACTTGGACTTTTAA
AACCTATAAATGGTGAGGTGACTTTAAGCGATTATAAAAAGATAGGATATTTTGAACAGGAAATTATGGAATATAATGAC
AGTTTAGTTTTATATGATGTTTGGAATGAGTTCCCTGATCTAACTCAAACAGAAGTAAGGAGTAGTCTTGCTAAATGTGG
GTTAACAAGGCAGCATATAGATAGCCCTATTAATATATTAAGTGGAGGAGAACAGGCTAAGGTCAGACTGTGTAAGTTAA
TCAATGAACCTAGCAATGTATTAGTCTTAGATGAACCTACAAACCACTTAGATATTTATGCAAAAAATGAGCTTAAGCAT
GCTTTAAAAGAGTATGATGGTAGCATAATTCTAGTATGCCATGAGCCAGAGTTTTATAAAGATATTGCAACAGATATATG
GAATTGTGAAGATTGGAGATATTGTAGTGTGTAA

Upstream 100 bases:

>100_bases
ACCTCCTGTGCTCATAAACAGTACAGATTTATTTATGAACTTGGACTTAAGCCTTTGTGGTGCTATCATTCAATTAAAGG
ATACAAGGAGGTGTAGAGCT

Downstream 100 bases:

>100_bases
TATAAGGGTGAAATAATTCTTTAATAAAAAATTATGAGAACAGTGACATATAGGTGTCACTGTTTTTGTGTTAGAATATT
TTTAAATTAAGGTTTGTGCT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSILTVESMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEG
ITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTLNQIATMQEILEKNDFYSINSKIQATVVGLGIKELLDRDVS
ALSGGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNGFLNSVVNVIYHLEHKTLTRYA
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMP
ENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEYND
SLVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV

Sequences:

>Translated_517_residues
MSILTVESMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEG
ITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTLNQIATMQEILEKNDFYSINSKIQATVVGLGIKELLDRDVS
ALSGGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNGFLNSVVNVIYHLEHKTLTRYA
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMP
ENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEYND
SLVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV
>Mature_516_residues
SILTVESMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEGI
TVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTLNQIATMQEILEKNDFYSINSKIQATVVGLGIKELLDRDVSA
LSGGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNGFLNSVVNVIYHLEHKTLTRYAG
NYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMPE
NIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEYNDS
LVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKHA
LKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=517, Percent_Identity=28.2398452611219, Blast_Score=216, Evalue=6e-56,
Organism=Homo sapiens, GI10947135, Length=530, Percent_Identity=30.377358490566, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI69354671, Length=530, Percent_Identity=30.377358490566, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=29.4003868471954, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI10947137, Length=517, Percent_Identity=29.4003868471954, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI108773784, Length=213, Percent_Identity=30.5164319248826, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI108773782, Length=213, Percent_Identity=30.5164319248826, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789751, Length=518, Percent_Identity=33.011583011583, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1787041, Length=511, Percent_Identity=33.8551859099804, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI1787182, Length=519, Percent_Identity=30.4431599229287, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI2367384, Length=506, Percent_Identity=29.8418972332016, Blast_Score=225, Evalue=6e-60,
Organism=Escherichia coli, GI1788165, Length=285, Percent_Identity=24.9122807017544, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787758, Length=167, Percent_Identity=26.3473053892216, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI87081782, Length=178, Percent_Identity=30.3370786516854, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788225, Length=192, Percent_Identity=26.5625, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=193, Percent_Identity=24.8704663212435, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788897, Length=196, Percent_Identity=27.5510204081633, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=29.6153846153846, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17553372, Length=521, Percent_Identity=29.9424184261036, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=538, Percent_Identity=27.8810408921933, Blast_Score=198, Evalue=7e-51,
Organism=Saccharomyces cerevisiae, GI6320874, Length=528, Percent_Identity=30.6818181818182, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6321121, Length=524, Percent_Identity=30.3435114503817, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=28.3887468030691, Blast_Score=134, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=396, Percent_Identity=26.010101010101, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6323278, Length=395, Percent_Identity=27.0886075949367, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24666836, Length=518, Percent_Identity=31.4671814671815, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24641342, Length=527, Percent_Identity=29.6015180265655, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24642252, Length=520, Percent_Identity=30, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI18859989, Length=520, Percent_Identity=30, Blast_Score=206, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59465; Mature: 59334

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILTVESMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTI
CCEEEEEHHHHHHCCEEEEECCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHEEECCCC
DWNSKFSIGYMDQLVELKEGITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NQIATMQEILEKNDFYSINSKIQATVVGLGIKELLDRDVSALSGGQRTKILLAKLLLEKP
HHHHHHHHHHHCCCCEEECCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
DILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNGFLNSVVNVIYHLEHKTLTRYA
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIKKEIIKPYFNFKSVRMPENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGI
HHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCEECCCCEEEEECCCCC
GKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEYNDSLVLYDVWNEFPDLTQTEVR
CHHHHHHHHHHHHCCCCCCEEEHHHHHHCHHHHHHHHCCCCEEEEECHHCCCCCCHHHHH
SSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
HHHHHCCCCHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV
HHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure 
SILTVESMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTI
CEEEEEHHHHHHCCEEEEECCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHEEECCCC
DWNSKFSIGYMDQLVELKEGITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NQIATMQEILEKNDFYSINSKIQATVVGLGIKELLDRDVSALSGGQRTKILLAKLLLEKP
HHHHHHHHHHHCCCCEEECCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
DILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNGFLNSVVNVIYHLEHKTLTRYA
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIKKEIIKPYFNFKSVRMPENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGI
HHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCEECCCCEEEEECCCCC
GKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEYNDSLVLYDVWNEFPDLTQTEVR
CHHHHHHHHHHHHCCCCCCEEEHHHHHHCHHHHHHHHCCCCEEEEECHHCCCCCCHHHHH
SSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
HHHHHCCCCHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV
HHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]