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The map label for this gene is 226947965

Identifier: 226947965

GI number: 226947965

Start: 886605

End: 887132

Strand: Direct

Name: 226947965

Synonym: CLM_0824

Alternate gene names: NA

Gene position: 886605-887132 (Clockwise)

Preceding gene: 226947964

Following gene: 226947966

Centisome position: 21.34

GC content: 40.72

Gene sequence:

>528_bases
ATGTATGCAAAAGGAATGGCAACAAGATATATAGCAACTCATTTAGAAAATATATATGGTTTTGAGGCTTCACCTACTTT
AATATCAGGTATAACAGATAAAATTACGCCTGTAGCAAAGGAATGGCAAAATAGACCTCTGGAGCCTGTATACCCAATAA
TATTTATGAATGTTTACACAAAATTCTTGACAGACTCTAACATTGACGCTCTTTGCTATCTGATTGACGTTTACCCCGAT
TTTCTGTATCTCCGCTGTCATTGCCTTTTATTCACGGTTTGTTTTTTGCAATTATTCGGTTGGCCGTATATAATGTATGG
TGATATTGTTTGCAAGCGAAAGGACGGTAAAGTTATGGAATATATTCCAGCCCCGAAGTCGCGAAAAAATGGGGCATTTC
AGAACGGCGGGTACAGAAGCTATGCGAGGAAAACCGTATACCGGGTGTTGTCCGTTTCAGCCGTATGTGGCTTATTCCCA
AAGACGCGGAGAAGCCCGCTGACGGACGACATACACGCAGAAAAATGA

Upstream 100 bases:

>100_bases
CTTATTAAACAACTAATTAAAGAAACAAAACCTACAAGTGCAAGAGATGTTCAAGAAAAATTAAACTGATATTTCAGTAA
TTGAAGATCAAGTAATTGGT

Downstream 100 bases:

>100_bases
AGGACGGTGAAAACAATTGAAACATATTTTCTTTGTTGAAGATGATTTGAGTTTAATTAATGGGTTATCTTTTGCTATCA
AAAAACAAGGATATGAAATA

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MYAKGMATRYIATHLENIYGFEASPTLISGITDKITPVAKEWQNRPLEPVYPIIFMNVYTKFLTDSNIDALCYLIDVYPD
FLYLRCHCLLFTVCFLQLFGWPYIMYGDIVCKRKDGKVMEYIPAPKSRKNGAFQNGGYRSYARKTVYRVLSVSAVCGLFP
KTRRSPLTDDIHAEK

Sequences:

>Translated_175_residues
MYAKGMATRYIATHLENIYGFEASPTLISGITDKITPVAKEWQNRPLEPVYPIIFMNVYTKFLTDSNIDALCYLIDVYPD
FLYLRCHCLLFTVCFLQLFGWPYIMYGDIVCKRKDGKVMEYIPAPKSRKNGAFQNGGYRSYARKTVYRVLSVSAVCGLFP
KTRRSPLTDDIHAEK
>Mature_175_residues
MYAKGMATRYIATHLENIYGFEASPTLISGITDKITPVAKEWQNRPLEPVYPIIFMNVYTKFLTDSNIDALCYLIDVYPD
FLYLRCHCLLFTVCFLQLFGWPYIMYGDIVCKRKDGKVMEYIPAPKSRKNGAFQNGGYRSYARKTVYRVLSVSAVCGLFP
KTRRSPLTDDIHAEK

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 20154; Mature: 20154

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAKGMATRYIATHLENIYGFEASPTLISGITDKITPVAKEWQNRPLEPVYPIIFMNVYT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KFLTDSNIDALCYLIDVYPDFLYLRCHCLLFTVCFLQLFGWPYIMYGDIVCKRKDGKVME
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCEEE
YIPAPKSRKNGAFQNGGYRSYARKTVYRVLSVSAVCGLFPKTRRSPLTDDIHAEK
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYAKGMATRYIATHLENIYGFEASPTLISGITDKITPVAKEWQNRPLEPVYPIIFMNVYT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KFLTDSNIDALCYLIDVYPDFLYLRCHCLLFTVCFLQLFGWPYIMYGDIVCKRKDGKVME
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCEEE
YIPAPKSRKNGAFQNGGYRSYARKTVYRVLSVSAVCGLFPKTRRSPLTDDIHAEK
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]