Click here to switch to the map view.

The map label for this gene is 226947889

Identifier: 226947889

GI number: 226947889

Start: 799393

End: 799887

Strand: Direct

Name: 226947889

Synonym: CLM_0745

Alternate gene names: NA

Gene position: 799393-799887 (Clockwise)

Preceding gene: 226947885

Following gene: 226947892

Centisome position: 19.24

GC content: 38.79

Gene sequence:

>495_bases
ATGAGACGAAAAGAAAGAGAAATAAAAGATATTAACGAGATTTTCCAAGTTATTGAAAATTGTAGTGCTGTTCATGTTGG
TATGGTGGATGAAGGCAAGCCATATGTTGTAGCGCTTAGCTTTGGGTATGATCGCGAAGGCGATGACTTAATCTTGTATC
TTCATAGTGCCATGGAAGGCAGAAAAATGGATATTTTAAGAAAAAATCCAGCAGTGTATTTTCAAATGGATTGTGTAAAT
GAACTGATCAAAACAACATCGGAAAACCCTTGTGCGTACAGTTGGAGGTTTGACAGCGTAATGGGCAGTGGAAATGTAGA
ATTTATTGAAGATGAAACAGGTAAGTCACATGCGCTCACTCGCATTCTCCAGCATCTTGACAAAACCATGCGCAATATAA
TTTCCCTTCTCAAGCACTCTCTAAGACCTGTGTTTTTCGGGTTTGCTCAAATGATTTTACAGGAAAGCGCCGTAGATAAA
GGAATAGCCGTTTAA

Upstream 100 bases:

>100_bases
TAGCATAGGGACGTTTTTGTAATATACTTAAAAACATATGCGGTACAATTTAGAATTTATCTGTATGTAATGTGGTGTAA
ATATTAAAGGAGGCAATGGT

Downstream 100 bases:

>100_bases
TTTTCTATGGGTCTACCCATCCTTTCACAAATAATAATGCTTGTGGTATCCTAGTACAAAGGAGGATTTTAAATGATTAA
AGGTGTAGCTTTTGACGCAT

Product: pyridoxamine 5'-phosphate oxidase family protein

Products: NA

Alternate protein names: Nitroimidazole Resistance Protein; Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5\-Phosphate-Related Protein; 5-Nitroimidazole Antibiotic Resistance; 5-Nitroimadazole Antibiotic Resistance Protein; Antibiotic Resistance Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRRKEREIKDINEIFQVIENCSAVHVGMVDEGKPYVVALSFGYDREGDDLILYLHSAMEGRKMDILRKNPAVYFQMDCVN
ELIKTTSENPCAYSWRFDSVMGSGNVEFIEDETGKSHALTRILQHLDKTMRNIISLLKHSLRPVFFGFAQMILQESAVDK
GIAV

Sequences:

>Translated_164_residues
MRRKEREIKDINEIFQVIENCSAVHVGMVDEGKPYVVALSFGYDREGDDLILYLHSAMEGRKMDILRKNPAVYFQMDCVN
ELIKTTSENPCAYSWRFDSVMGSGNVEFIEDETGKSHALTRILQHLDKTMRNIISLLKHSLRPVFFGFAQMILQESAVDK
GIAV
>Mature_164_residues
MRRKEREIKDINEIFQVIENCSAVHVGMVDEGKPYVVALSFGYDREGDDLILYLHSAMEGRKMDILRKNPAVYFQMDCVN
ELIKTTSENPCAYSWRFDSVMGSGNVEFIEDETGKSHALTRILQHLDKTMRNIISLLKHSLRPVFFGFAQMILQESAVDK
GIAV

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18763; Mature: 18763

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKEREIKDINEIFQVIENCSAVHVGMVDEGKPYVVALSFGYDREGDDLILYLHSAMEG
CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCC
RKMDILRKNPAVYFQMDCVNELIKTTSENPCAYSWRFDSVMGSGNVEFIEDETGKSHALT
CHHHHEECCCCEEEEHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCEEEEECCCCCHHHHH
RILQHLDKTMRNIISLLKHSLRPVFFGFAQMILQESAVDKGIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRKEREIKDINEIFQVIENCSAVHVGMVDEGKPYVVALSFGYDREGDDLILYLHSAMEG
CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCC
RKMDILRKNPAVYFQMDCVNELIKTTSENPCAYSWRFDSVMGSGNVEFIEDETGKSHALT
CHHHHEECCCCEEEEHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCEEEEECCCCCHHHHH
RILQHLDKTMRNIISLLKHSLRPVFFGFAQMILQESAVDKGIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA