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The map label for this gene is glnK [H]

Identifier: 226947867

GI number: 226947867

Start: 775930

End: 777228

Strand: Reverse

Name: glnK [H]

Synonym: CLM_0722

Alternate gene names: 226947867

Gene position: 777228-775930 (Counterclockwise)

Preceding gene: 226947869

Following gene: 226947866

Centisome position: 18.7

GC content: 23.25

Gene sequence:

>1299_bases
ATGAAAATTAAGAATGATTTAAATCAACTTATATTTATAGGCTTTTTAGTTATGTTTTCATCTCAAATTTATATAAAATT
ATTTGTTAATCATTTCAATATATCCTTTGGTATCATAATTCTAATAATTCTACTATATATGATTGAAATGGATAATAAAA
TAATGATAGCTATCACTTCTTCTTGTCTTGTATATATAATAAGAATTTTAGTTTATTTCTTAGAAAATAGTGAAATAAAT
TCTGCTCTTAAATTAGGTATACGAAATCATTTCCCAGAGTTCATATTTTACTTAGTTTATATAACTATATACTTTATTAT
TATTAATATTAAAAATAAAAATTTAAATTCCCTTTTATTTAAACTCATTATCTGTGATTTTTTTGCTAATTTTACTGAAA
TGTCTATTAGACATACTATTTATTTAGAAAATTTTAGTCTTAATATAATAATAGGATTACTGTTTGTTGCATTTTTAAGA
TCAACATTAATATGGGTTATGATAAATTTAATGATTAGATATAATACTCCCCTCCTAAAGAAAGAGCATACAGAAAGATA
TATAAAGCTATTAGCATCAAATTCTACTTTAAAAAGTGAAGTTTATCTTATGGAAAAATCTATGGATAACATAGAAAAAG
TCATGGGAAAATCCTATAAGTTGTATATGGATGTAAGCCAAAAAGATTTAGATGAGGCTTTAAAAACGAAAACTATGGAA
ATTACAAAAGACATCCATGAAATAAAAAAAGAGTTTAATTTGATAGTTAGAGGTGTTAATGAATTAACAAATACAAAGGA
ACTTAAAGATAGTATGACTTATTATGAAATACTAGATATATTAAGACATATGATAAATATAGAAATTAAAAATACAAAGA
TAATCCTTAAGATTCGAAAAGGAGAAAATTTTAATACAATATATCATTATTATTTAATATCTATATTTAGAAATATAATT
ATGAATAGCATTGATGCTTTAGAGGACATAAATAATGGACTAGTATATTTAAATCATACTTATACCAGCATTGATAATAT
AAGTGGACATTGTTTTGAAATTATAGATAATGGTCAAGGGATAGATAAAGAAGATAAGAAATATGTATTTAATCCAGGCT
TCTCTACTAAAATTGATTTTGATACAGGGGATGTGAATCGTGGACTGGGATTAAGTATAGTAAAAGATATAGTTGAAACC
GAGCTAAATGGAATTGTGAAACTAACATCTATAAAAGGAAAAGGTACTAAATTTATGATTTTTATACCCAAAGATGTTTT
AGAGGGGGAAAGAATTTGA

Upstream 100 bases:

>100_bases
TAATAGATACTATCAGCTATTCTAATAGATTTTTCAAAGGTTATTTAAAAAAATTATTGAATACTACTATTTAAAGAAGC
TTGATAAGGAGATGAAAATA

Downstream 100 bases:

>100_bases
GAGTATTAATAATAGATGATGACATAAATGTTCATAAGATTCTTAATAAAATAATAAATCATGAATGCCTGGGGGAAGTA
ATAAAGAATGCTCCCCTAAA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKIKNDLNQLIFIGFLVMFSSQIYIKLFVNHFNISFGIIILIILLYMIEMDNKIMIAITSSCLVYIIRILVYFLENSEIN
SALKLGIRNHFPEFIFYLVYITIYFIIINIKNKNLNSLLFKLIICDFFANFTEMSIRHTIYLENFSLNIIIGLLFVAFLR
STLIWVMINLMIRYNTPLLKKEHTERYIKLLASNSTLKSEVYLMEKSMDNIEKVMGKSYKLYMDVSQKDLDEALKTKTME
ITKDIHEIKKEFNLIVRGVNELTNTKELKDSMTYYEILDILRHMINIEIKNTKIILKIRKGENFNTIYHYYLISIFRNII
MNSIDALEDINNGLVYLNHTYTSIDNISGHCFEIIDNGQGIDKEDKKYVFNPGFSTKIDFDTGDVNRGLGLSIVKDIVET
ELNGIVKLTSIKGKGTKFMIFIPKDVLEGERI

Sequences:

>Translated_432_residues
MKIKNDLNQLIFIGFLVMFSSQIYIKLFVNHFNISFGIIILIILLYMIEMDNKIMIAITSSCLVYIIRILVYFLENSEIN
SALKLGIRNHFPEFIFYLVYITIYFIIINIKNKNLNSLLFKLIICDFFANFTEMSIRHTIYLENFSLNIIIGLLFVAFLR
STLIWVMINLMIRYNTPLLKKEHTERYIKLLASNSTLKSEVYLMEKSMDNIEKVMGKSYKLYMDVSQKDLDEALKTKTME
ITKDIHEIKKEFNLIVRGVNELTNTKELKDSMTYYEILDILRHMINIEIKNTKIILKIRKGENFNTIYHYYLISIFRNII
MNSIDALEDINNGLVYLNHTYTSIDNISGHCFEIIDNGQGIDKEDKKYVFNPGFSTKIDFDTGDVNRGLGLSIVKDIVET
ELNGIVKLTSIKGKGTKFMIFIPKDVLEGERI
>Mature_432_residues
MKIKNDLNQLIFIGFLVMFSSQIYIKLFVNHFNISFGIIILIILLYMIEMDNKIMIAITSSCLVYIIRILVYFLENSEIN
SALKLGIRNHFPEFIFYLVYITIYFIIINIKNKNLNSLLFKLIICDFFANFTEMSIRHTIYLENFSLNIIIGLLFVAFLR
STLIWVMINLMIRYNTPLLKKEHTERYIKLLASNSTLKSEVYLMEKSMDNIEKVMGKSYKLYMDVSQKDLDEALKTKTME
ITKDIHEIKKEFNLIVRGVNELTNTKELKDSMTYYEILDILRHMINIEIKNTKIILKIRKGENFNTIYHYYLISIFRNII
MNSIDALEDINNGLVYLNHTYTSIDNISGHCFEIIDNGQGIDKEDKKYVFNPGFSTKIDFDTGDVNRGLGLSIVKDIVET
ELNGIVKLTSIKGKGTKFMIFIPKDVLEGERI

Specific function: Member of the two-component regulatory system glnK/glnL that positively regulates the expression of the glsA-glnT operon in response to glutamine. Probably activates glnL by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50470; Mature: 50470

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKNDLNQLIFIGFLVMFSSQIYIKLFVNHFNISFGIIILIILLYMIEMDNKIMIAITS
CCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCHHHHHHHHHHHHHHHCCCCEEEEEEHH
SCLVYIIRILVYFLENSEINSALKLGIRNHFPEFIFYLVYITIYFIIINIKNKNLNSLLF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCHHHHHH
KLIICDFFANFTEMSIRHTIYLENFSLNIIIGLLFVAFLRSTLIWVMINLMIRYNTPLLK
HHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KEHTERYIKLLASNSTLKSEVYLMEKSMDNIEKVMGKSYKLYMDVSQKDLDEALKTKTME
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
ITKDIHEIKKEFNLIVRGVNELTNTKELKDSMTYYEILDILRHMINIEIKNTKIILKIRK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEEEC
GENFNTIYHYYLISIFRNIIMNSIDALEDINNGLVYLNHTYTSIDNISGHCFEIIDNGQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCC
IDKEDKKYVFNPGFSTKIDFDTGDVNRGLGLSIVKDIVETELNGIVKLTSIKGKGTKFMI
CCCCCCCEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEE
FIPKDVLEGERI
EECHHHCCCCCC
>Mature Secondary Structure
MKIKNDLNQLIFIGFLVMFSSQIYIKLFVNHFNISFGIIILIILLYMIEMDNKIMIAITS
CCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCHHHHHHHHHHHHHHHCCCCEEEEEEHH
SCLVYIIRILVYFLENSEINSALKLGIRNHFPEFIFYLVYITIYFIIINIKNKNLNSLLF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCHHHHHH
KLIICDFFANFTEMSIRHTIYLENFSLNIIIGLLFVAFLRSTLIWVMINLMIRYNTPLLK
HHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KEHTERYIKLLASNSTLKSEVYLMEKSMDNIEKVMGKSYKLYMDVSQKDLDEALKTKTME
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
ITKDIHEIKKEFNLIVRGVNELTNTKELKDSMTYYEILDILRHMINIEIKNTKIILKIRK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEEEC
GENFNTIYHYYLISIFRNIIMNSIDALEDINNGLVYLNHTYTSIDNISGHCFEIIDNGQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCC
IDKEDKKYVFNPGFSTKIDFDTGDVNRGLGLSIVKDIVETELNGIVKLTSIKGKGTKFMI
CCCCCCCEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEE
FIPKDVLEGERI
EECHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8011666 [H]