Click here to switch to the map view.

The map label for this gene is yeiJ [C]

Identifier: 226947850

GI number: 226947850

Start: 758388

End: 759611

Strand: Reverse

Name: yeiJ [C]

Synonym: CLM_0705

Alternate gene names: 226947850

Gene position: 759611-758388 (Counterclockwise)

Preceding gene: 226947855

Following gene: 226947849

Centisome position: 18.28

GC content: 32.6

Gene sequence:

>1224_bases
ATGGAAAAATTTATAAGTTTCATAGGTATTTTTGTTTTCTTAGGTATCTGTTATCTAATATCAGAAAACAAGAAAAAGGT
TAGGTTTAAACTAGTCTTTGCAGGAATTATTATTCAATTTATTTTCGCTTTTTTAATTTTAAAAACATCTATTGGTAAAA
TAACTTTTGAAAAACTTTCTGATTTTATTACAGCTATTTTAGGATTTACTAAAAATGGCTCAGAATTTTTATTTGGTGGA
TTAGTTAACAATGTGGATAGTTTTGGGTATATATTTGCTTTTCAAGTATTGCCAACTATTATATTTTTCTCATCTTTAAT
GGCAGTTCTATATTATTTAGGTGTTATGCAATTTTTAATAAGACATATAGCTAATTTTATGGCTAAAACTTTAGGAACTT
CTGGTGCTGAATCTCTATCTGCTGCTGCGAATATATTTGTTGGACAAACTGAAGCTCCTTTAATAGTAAAACCTTACATA
GAAAAAATGACAAGATCTGAACTTCATTCTGTTATGGTTGGTGGAATGGCTACAGTAGCTGGTAGTGTAATGGCTGGATA
TATAGGTATGGGAATAAGTTCAGCTCACTTATTATCAGCCTCCATAATGTCTGCCCCAGCAGCCTTTGTGACAGCAAAAA
TAATAGTTCCTGAAACAGAGGAGCCTATAACTAAAGGTAATGTTAATTGCGAAGTAGAGAAATTAGATAAGAATGTAATT
GATGCAGCTGCTAGAGGTGCCTCTGAAGGTCTTCAAATGGCTCTTAATGTTGGAGCTATGTTAATAGCTTTTGTTGCTAT
AATCGCCATGTTAAATGCAGGTTTAGAAGGTATTGGACATTTAGTTGGAATTAATGGTTTAAACTTTGAAAATGTATTGG
GTTATATTTGTGCTCCTTTTGCTTACATAATGGGTATACCTTCTCAAGATATGTTAACAGCAGGTTCCCTTATTGGACAA
AAAACCGTTATAAACGAGTTCGTAGCATATTCAAATCTATCTACATTTATAAAGCAAGGAACGTTAAATCCAAGAACAGT
AACCATACTAACTTATGCCCTATGTGGATTTGCTAATTTCAGTTCCATAGCAGTACAACTAGGTGGTATAGGAGAACTTG
CGCCAAAAAGAAGAAGTGAAATTGCCCAGCTTGGAATAAAAGCTCTAATAGGTGGTACAGTAGCTAGCTTCTTAACAGCT
TGTATTGCTGGAATATTAATATAA

Upstream 100 bases:

>100_bases
ATTGTGTTTATGTTTAAGCCTTCCATATTGTGAAGGCTTTTTATTTTTGCTATTTTTTATAATTTAATAGCGCTCACTTA
CAAAAAATAAGGAGGATTTT

Downstream 100 bases:

>100_bases
AATAAATAGAACCTGTATAAAAACAATTCTCTATTAAACTAAAAACTGAATTTTTATTTTAAAGTAAATAAAGAGGTTGC
CTCAAAATTAAATCTATTTT

Product: nucleoside transporter, NupC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MEKFISFIGIFVFLGICYLISENKKKVRFKLVFAGIIIQFIFAFLILKTSIGKITFEKLSDFITAILGFTKNGSEFLFGG
LVNNVDSFGYIFAFQVLPTIIFFSSLMAVLYYLGVMQFLIRHIANFMAKTLGTSGAESLSAAANIFVGQTEAPLIVKPYI
EKMTRSELHSVMVGGMATVAGSVMAGYIGMGISSAHLLSASIMSAPAAFVTAKIIVPETEEPITKGNVNCEVEKLDKNVI
DAAARGASEGLQMALNVGAMLIAFVAIIAMLNAGLEGIGHLVGINGLNFENVLGYICAPFAYIMGIPSQDMLTAGSLIGQ
KTVINEFVAYSNLSTFIKQGTLNPRTVTILTYALCGFANFSSIAVQLGGIGELAPKRRSEIAQLGIKALIGGTVASFLTA
CIAGILI

Sequences:

>Translated_407_residues
MEKFISFIGIFVFLGICYLISENKKKVRFKLVFAGIIIQFIFAFLILKTSIGKITFEKLSDFITAILGFTKNGSEFLFGG
LVNNVDSFGYIFAFQVLPTIIFFSSLMAVLYYLGVMQFLIRHIANFMAKTLGTSGAESLSAAANIFVGQTEAPLIVKPYI
EKMTRSELHSVMVGGMATVAGSVMAGYIGMGISSAHLLSASIMSAPAAFVTAKIIVPETEEPITKGNVNCEVEKLDKNVI
DAAARGASEGLQMALNVGAMLIAFVAIIAMLNAGLEGIGHLVGINGLNFENVLGYICAPFAYIMGIPSQDMLTAGSLIGQ
KTVINEFVAYSNLSTFIKQGTLNPRTVTILTYALCGFANFSSIAVQLGGIGELAPKRRSEIAQLGIKALIGGTVASFLTA
CIAGILI
>Mature_407_residues
MEKFISFIGIFVFLGICYLISENKKKVRFKLVFAGIIIQFIFAFLILKTSIGKITFEKLSDFITAILGFTKNGSEFLFGG
LVNNVDSFGYIFAFQVLPTIIFFSSLMAVLYYLGVMQFLIRHIANFMAKTLGTSGAESLSAAANIFVGQTEAPLIVKPYI
EKMTRSELHSVMVGGMATVAGSVMAGYIGMGISSAHLLSASIMSAPAAFVTAKIIVPETEEPITKGNVNCEVEKLDKNVI
DAAARGASEGLQMALNVGAMLIAFVAIIAMLNAGLEGIGHLVGINGLNFENVLGYICAPFAYIMGIPSQDMLTAGSLIGQ
KTVINEFVAYSNLSTFIKQGTLNPRTVTILTYALCGFANFSSIAVQLGGIGELAPKRRSEIAQLGIKALIGGTVASFLTA
CIAGILI

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI42542381, Length=420, Percent_Identity=41.1904761904762, Blast_Score=331, Evalue=7e-91,
Organism=Homo sapiens, GI227116277, Length=420, Percent_Identity=39.2857142857143, Blast_Score=325, Evalue=5e-89,
Organism=Homo sapiens, GI11545853, Length=420, Percent_Identity=42.3809523809524, Blast_Score=324, Evalue=9e-89,
Organism=Escherichia coli, GI1788485, Length=413, Percent_Identity=41.8886198547215, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1788488, Length=414, Percent_Identity=42.7536231884058, Blast_Score=298, Evalue=6e-82,
Organism=Escherichia coli, GI1788737, Length=415, Percent_Identity=29.3975903614458, Blast_Score=181, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI17560276, Length=391, Percent_Identity=36.3171355498721, Blast_Score=275, Evalue=4e-74,
Organism=Caenorhabditis elegans, GI71991794, Length=394, Percent_Identity=37.0558375634518, Blast_Score=275, Evalue=4e-74,
Organism=Caenorhabditis elegans, GI25146537, Length=191, Percent_Identity=37.17277486911, Blast_Score=144, Evalue=6e-35,
Organism=Drosophila melanogaster, GI45552519, Length=408, Percent_Identity=39.4607843137255, Blast_Score=317, Evalue=8e-87,
Organism=Drosophila melanogaster, GI45552517, Length=408, Percent_Identity=39.4607843137255, Blast_Score=317, Evalue=9e-87,
Organism=Drosophila melanogaster, GI19921868, Length=408, Percent_Identity=39.4607843137255, Blast_Score=317, Evalue=9e-87,
Organism=Drosophila melanogaster, GI281360430, Length=406, Percent_Identity=36.6995073891626, Blast_Score=271, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43326; Mature: 43326

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFISFIGIFVFLGICYLISENKKKVRFKLVFAGIIIQFIFAFLILKTSIGKITFEKLS
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DFITAILGFTKNGSEFLFGGLVNNVDSFGYIFAFQVLPTIIFFSSLMAVLYYLGVMQFLI
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHIANFMAKTLGTSGAESLSAAANIFVGQTEAPLIVKPYIEKMTRSELHSVMVGGMATVA
HHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
GSVMAGYIGMGISSAHLLSASIMSAPAAFVTAKIIVPETEEPITKGNVNCEVEKLDKNVI
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCCEEHHHHHHHHH
DAAARGASEGLQMALNVGAMLIAFVAIIAMLNAGLEGIGHLVGINGLNFENVLGYICAPF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHH
AYIMGIPSQDMLTAGSLIGQKTVINEFVAYSNLSTFIKQGTLNPRTVTILTYALCGFANF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
SSIAVQLGGIGELAPKRRSEIAQLGIKALIGGTVASFLTACIAGILI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKFISFIGIFVFLGICYLISENKKKVRFKLVFAGIIIQFIFAFLILKTSIGKITFEKLS
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DFITAILGFTKNGSEFLFGGLVNNVDSFGYIFAFQVLPTIIFFSSLMAVLYYLGVMQFLI
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHIANFMAKTLGTSGAESLSAAANIFVGQTEAPLIVKPYIEKMTRSELHSVMVGGMATVA
HHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
GSVMAGYIGMGISSAHLLSASIMSAPAAFVTAKIIVPETEEPITKGNVNCEVEKLDKNVI
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCCEEHHHHHHHHH
DAAARGASEGLQMALNVGAMLIAFVAIIAMLNAGLEGIGHLVGINGLNFENVLGYICAPF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHH
AYIMGIPSQDMLTAGSLIGQKTVINEFVAYSNLSTFIKQGTLNPRTVTILTYALCGFANF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
SSIAVQLGGIGELAPKRRSEIAQLGIKALIGGTVASFLTACIAGILI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]