| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is ltaS2 [H]
Identifier: 226947848
GI number: 226947848
Start: 754465
End: 756375
Strand: Direct
Name: ltaS2 [H]
Synonym: CLM_0703
Alternate gene names: 226947848
Gene position: 754465-756375 (Clockwise)
Preceding gene: 226947846
Following gene: 226947851
Centisome position: 18.16
GC content: 28.47
Gene sequence:
>1911_bases ATGGAGAAGGCTTTAAAGTTGAAAAATATAGTTACGAAAATAATTATTAGAAATTTAGATATAATATTATTTTTAATATT AGTAAGTTTAAAAGTAATGTTTTATGGAAAAGAAATATCTCCAGAGTTTTTTAGCTATAAGTATATATTATTACCAGTTG TAGCATCTGTGGGAGTACTATTAGGTATAGGGTATTTCCTCCAAAAACACAAAAGAACTAAATTTTTATATGTGTTAAAC ATAATAATTAGTTCTATAATTATAGCAGATTTGCTATACTACAGATATTATAAAGACATTATATCTATAGGGGCTATAAG AAATGCCTTTTTATTAGGAGGAGTTGCTTCTAGTATTACAAGCTTATTTAAACTGAAGGATTGTGTATATTTTCTAGATA TATTATTGATTATACCTTTCCTAAAGGTGTATAGAAATATGCCTTATAAGGAAAATAAAAAAATTATAAGAATAGGTGTG GGATCTTTAATATTAGCAGGAGCTATTTTATTAAATGGTATAAATATATATAAATTATCAGTAGATCAACCAGGATTGCT TAATACTATGAGTAATAGGATATATATAACTAAGGTTTTAGGGAATGTAAACTTTCATGTTATAGATGCTTATCAGTTCA CAAGAAATAAGATAAATAATAGTAAAAAGCTTCCAGAAGCTAAAGAAAAAGAGTTAGTAGATAACTTTGAGGGAAAATCA CAAATACAGGGAGAAAAATTAAAGGGTGTAGGAGAAGGAAAAAATTTAATAGTTATACAAGTAGAAGCACTTCAACAATT TGCTATAAATGCAAAGGTGGAAGGTCAGGAAGTAACACCTAATTTAAATAAATGGATAAATAAAAGTATGTATTTTGACA ATTATTTTTATCAAGTAGCAGCAGGGAATACATCTGATGCAGAGTTTTTGTCTAATAATTCATTATATCCTGCAGTTTCA GGAGCAGCTTATTATATGTATAGTGGTAATCAATTTAAATCGCTACCAAGTACACTTCAAGATAAGGGATACTACACAGC GGCTATGCACGGCTATAAAGATGGATTTTGGAATAGAAATGTAATGTACAAAGCTCAAAAATTCCAAGATTTTCATGGGG AAAGTACTTATAACATAGATGAACAGGTAGGGTTAGGTCTTAGTGATAAGTCTTTCTTTAATCAATCTTTGGAAAAAATT AAGACTTTTAAACAACCTTTTTATAGTTTTTTAATAACTTTAAGTAGTCATTTCCCTTACGATGATGTAAAAGGATATGG GGAATTTAATGTAGGAAAATATGAAGGTTCATTTTTAGGTAATTATTTAAAGGGTATACACTATACAGATGCTCAATTAG GAATGTTTTTAGAAAACCTTGAAAAAGAGGGATATTTAGATAATTCAATTGTAGTTATTTATGGAGATCATAATGCTGTA TCTAAAAATTATATACAAGAGTTATATGATTTTGTGGGAGAAAAATCACCGAATGATTTAAAATGGTATGAACTTCAAAA GGTACCTATGCTTATACACTTCCCACAGGACGAATATAAAGGAGTAGATCATACTTATGGTGGTCAAATAGATTTATATC CTACAATAGCTAACTTATATAATTTGCCTAGGAAATATATGTTAGGAAATGATTTATTAAATGTAGCTGACCCTAAGGTT ACTTTTAGAAATGGATCCTTTACCGATGGAAAAGCTTTTTATATATCTTGGACAGGAGAATACTATGATATAAAAACTGG AGAAAAGATTACTGAAACAGAGGAACTAAAGGCTAAAAAGCAGGAAAGCGCAAAGGATTTAGAAAGTTCAGATGAACTAT TAAATCATAATTTAATAAAAAAATTAGAAAGTGAATCAAAGGGGGAAGGGGAAAGTGAGCAAAGTAAATAG
Upstream 100 bases:
>100_bases TTTAAAATTTTTATGGGTTTAAATTAATATAATGTTTAGTAGATAAACAGAAGATAAATTTAATAATAAGTTTTATAAAT ATTATTAGTGAGGGATGGAA
Downstream 100 bases:
>100_bases GCTCACTTCCAAGTCTCAATTTAATAATAACAGGGTTATGTTAAGAAATTATTATACTAACATTATATTTTCTTAACATA ACCCTATTTTATATAATATA
Product: sulfatase family protein
Products: NA
Alternate protein names: LTA synthase 2; Polyglycerol phosphate synthase 2 [H]
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLN IIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGV GSLILAGAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKS QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVS GAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKI KTFKQPFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKV TFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK
Sequences:
>Translated_636_residues MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLN IIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGV GSLILAGAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKS QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVS GAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKI KTFKQPFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKV TFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK >Mature_636_residues MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLN IIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGV GSLILAGAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKS QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVS GAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKI KTFKQPFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKV TFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK
Specific function: Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Processed glycerol phosphate lipoteichoic acid synthase 2:Secreted. Note=The secretion into the extracellular medium is dependent on secA and ffh [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LTA synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012160 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: 3.1.6.- [C]
Molecular weight: Translated: 72609; Mature: 72609
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LGIGYFLQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSIT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAILLNGINIYKLS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEE VDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKS CCCCCHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVA CCCCCHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHCEEECCEEEEEE AGNTSDAEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRN CCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHCHHHHHHCCCEEEEECCCCCCCCCCC VMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQPFYSFLITLSSHFPY EEEHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV HHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLY HHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHCCCCCCCCCEEEEHHHHHHHH NLPRKYMLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKK HCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHH QESAKDLESSDELLNHNLIKKLESESKGEGESEQSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LGIGYFLQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSIT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAILLNGINIYKLS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEE VDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKS CCCCCHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVA CCCCCHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHCEEECCEEEEEE AGNTSDAEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRN CCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHCHHHHHHCCCEEEEECCCCCCCCCCC VMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQPFYSFLITLSSHFPY EEEHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV HHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLY HHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHCCCCCCCCCEEEEHHHHHHHH NLPRKYMLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKK HCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHH QESAKDLESSDELLNHNLIKKLESESKGEGESEQSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 10658653 [H]