| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226947840
Identifier: 226947840
GI number: 226947840
Start: 746622
End: 747371
Strand: Direct
Name: 226947840
Synonym: CLM_0695
Alternate gene names: NA
Gene position: 746622-747371 (Clockwise)
Preceding gene: 226947839
Following gene: 226947841
Centisome position: 17.97
GC content: 25.87
Gene sequence:
>750_bases ATGAATAAAATCATTATAGGATTTGCTCTGATTATTATAGCCGCTTTAACATTAACCTCATGTTCTAAGAAGAATAAGAT AAAATTTTACGATGAAATAGCCCCATATACCAAAAAAGAAACTAATGAGTTTAGTTATAAAATCATTAGTGACACAGTAA GAATAAAAAGCAATTGTGGAAATCTAAAGATTAAAAAAGGTAATGTTGATGAAGTTAAAGTTACCATAGAAAAACTTGTT GGTGGAAAAAGTGAGGATGAACTACAAGAAGCATTAAATTCTATTAGTTGCACTTTAGAGGATGGGACTATTAATATAAG TTTATCTAGTAAAGACAAGTCTAAAATCAGTTCTGTAAATATAGAGACCACTATAGTTATCCCTAAAAAGATTAATTCAT TAAATATAGAAAATAATATTGGAAATATTGAGTTAGAAGGTAATTATAAAGATTTGAAGGTTCAAATGGAAAATGGAAAT ATATCATACAAAGGAGAGTTAGAGAAATCTAATATAAGTTCTAAAGTAGGAAATATTAATTTAAATTTGCAACAATTAGA AAGTAATTATCAGTACGAGATTAATGGAGAAGTTGTAAATGTAAATATTAAAGTACCAAACAAAAGTAAAATTAATCTAA TAGGATCTATGGCTAATAAAATTAAAGTTAAAGATAGAGTAAATATTAGTGAAGATGGTGCGGTATTTGATATAAATGTA AAGACAGGCAATGTAAAGATAGAAAACTAA
Upstream 100 bases:
>100_bases TTATGAATATTTAACAAAAAAAGACTCATATTTTTCTAAGCTTATGAAAGAACTGTCTAAAAAATAGTACAAGCAGTTAG GTTATGGAAAGGAGGAAGAA
Downstream 100 bases:
>100_bases AAGAAGATAAGGGGGAGCGCTTATGGACTTTATAGTTAGAGAAGCAAAATTATCTGATTTAGATAATATTTTGGAACTAT GGAGAGAGTTATCTGTAGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNKIIIGFALIIIAALTLTSCSKKNKIKFYDEIAPYTKKETNEFSYKIISDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV GGKSEDELQEALNSISCTLEDGTINISLSSKDKSKISSVNIETTIVIPKKINSLNIENNIGNIELEGNYKDLKVQMENGN ISYKGELEKSNISSKVGNINLNLQQLESNYQYEINGEVVNVNIKVPNKSKINLIGSMANKIKVKDRVNISEDGAVFDINV KTGNVKIEN
Sequences:
>Translated_249_residues MNKIIIGFALIIIAALTLTSCSKKNKIKFYDEIAPYTKKETNEFSYKIISDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV GGKSEDELQEALNSISCTLEDGTINISLSSKDKSKISSVNIETTIVIPKKINSLNIENNIGNIELEGNYKDLKVQMENGN ISYKGELEKSNISSKVGNINLNLQQLESNYQYEINGEVVNVNIKVPNKSKINLIGSMANKIKVKDRVNISEDGAVFDINV KTGNVKIEN >Mature_249_residues MNKIIIGFALIIIAALTLTSCSKKNKIKFYDEIAPYTKKETNEFSYKIISDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV GGKSEDELQEALNSISCTLEDGTINISLSSKDKSKISSVNIETTIVIPKKINSLNIENNIGNIELEGNYKDLKVQMENGN ISYKGELEKSNISSKVGNINLNLQQLESNYQYEINGEVVNVNIKVPNKSKINLIGSMANKIKVKDRVNISEDGAVFDINV KTGNVKIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27577; Mature: 27577
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIIIGFALIIIAALTLTSCSKKNKIKFYDEIAPYTKKETNEFSYKIISDTVRIKSNCG CCEEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCEEEEEEEEEEEEECCCC NLKIKKGNVDEVKVTIEKLVGGKSEDELQEALNSISCTLEDGTINISLSSKDKSKISSVN CEEEECCCCCCEEEEEEHHHCCCCHHHHHHHHHHEEEEEECCEEEEEECCCCCCHHEEEC IETTIVIPKKINSLNIENNIGNIELEGNYKDLKVQMENGNISYKGELEKSNISSKVGNIN EEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE LNLQQLESNYQYEINGEVVNVNIKVPNKSKINLIGSMANKIKVKDRVNISEDGAVFDINV EEHHHHCCCCEEEECCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEE KTGNVKIEN EECCEEECC >Mature Secondary Structure MNKIIIGFALIIIAALTLTSCSKKNKIKFYDEIAPYTKKETNEFSYKIISDTVRIKSNCG CCEEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCEEEEEEEEEEEEECCCC NLKIKKGNVDEVKVTIEKLVGGKSEDELQEALNSISCTLEDGTINISLSSKDKSKISSVN CEEEECCCCCCEEEEEEHHHCCCCHHHHHHHHHHEEEEEECCEEEEEECCCCCCHHEEEC IETTIVIPKKINSLNIENNIGNIELEGNYKDLKVQMENGNISYKGELEKSNISSKVGNIN EEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE LNLQQLESNYQYEINGEVVNVNIKVPNKSKINLIGSMANKIKVKDRVNISEDGAVFDINV EEHHHHCCCCEEEECCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEE KTGNVKIEN EECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA