Click here to switch to the map view.

The map label for this gene is 226947750

Identifier: 226947750

GI number: 226947750

Start: 646746

End: 647330

Strand: Direct

Name: 226947750

Synonym: CLM_0599

Alternate gene names: NA

Gene position: 646746-647330 (Clockwise)

Preceding gene: 226947749

Following gene: 226947751

Centisome position: 15.56

GC content: 25.81

Gene sequence:

>585_bases
ATGTATAAATTAAGTAGTTTATCAACAAACACCTTGAAAATATCAAAGGATGAAAAATTAGATTTAGAAATATTTTTACA
TAGTAAGAGGGTTGCTATATATGTAAAAAAAATTGCAGAGTTGATGAAGCTTAGTTCAAAACAAAGTAATGACTTAGTTC
TATTAGCATTAAATCATGATATAGGTAAGGCTAGAATACCCTCTAATATATTAAATAAAAAAGATAAATTAAGTCATAGT
GAATTTGAAATTGTAAAAAGACATACTCAGTTTGGTGCAGATATATTAATGGAATATGGATATTGTTTAGAAATTTGTAA
TGTTGTAAAATTTCATCATGAAAATTTTGATGGCAGTGGCTATTATGGATTAAAAGGAAAATCTATTCCTATGGCGGCCA
GAATACTTCGTATAGCAGATGTATACGAGGCTTTAACTACTGATAGATGCTATAGAAGGGCTTATACAAGAGAAGCAGCT
TTAAAGATTATGGTAAAAGAAGAAAATTTATATGATCCTGAAATATTGGAATTATTTATTAAAAAAATATATATAAATTC
TTTTAATTTACGATTATGTATATAA

Upstream 100 bases:

>100_bases
TATTTAGCTAGATATAGCCAACATAATTAGTTTAAATATGTAAACTAATTATGTTGGCTTTTGTTTTTATAAATTTATAG
GGATGGGGAGGAGCAATAAT

Downstream 100 bases:

>100_bases
TTAGTCAGTAGTTATATATAACGAGGAGGAAATTTATGAAGTTTAAATTTAAAAATACTAAGGATAAAAATTTTATAAGT
GTAAAAAGTGTTATAAATAT

Product: HDIG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LKIMVKEENLYDPEILELFIKKIYINSFNLRLCI

Sequences:

>Translated_194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LKIMVKEENLYDPEILELFIKKIYINSFNLRLCI
>Mature_194_residues
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHS
EFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSGYYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAA
LKIMVKEENLYDPEILELFIKKIYINSFNLRLCI

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22486; Mature: 22486

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHD
CCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
IGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSG
CCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAALKIMVKEENLYDPEILELFI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
KKIYINSFNLRLCI
HHHHHCCCEEEEEC
>Mature Secondary Structure
MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLSSKQSNDLVLLALNHD
CCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
IGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLEICNVVKFHHENFDGSG
CCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YYGLKGKSIPMAARILRIADVYEALTTDRCYRRAYTREAALKIMVKEENLYDPEILELFI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
KKIYINSFNLRLCI
HHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]