| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is kdpE [C]
Identifier: 226947746
GI number: 226947746
Start: 640286
End: 641239
Strand: Direct
Name: kdpE [C]
Synonym: CLM_0595
Alternate gene names: 226947746
Gene position: 640286-641239 (Clockwise)
Preceding gene: 226947745
Following gene: 226947748
Centisome position: 15.41
GC content: 25.26
Gene sequence:
>954_bases GTGCAAAATATTATAATATTAGATGATATGAGTTATATGAGATATAGAGTTAAAGATCTTTTAGAGGAAAAGGACATAAA AGTTTATGAGACTTCTACTTCCTTTGAATTCTTTAATAAGCTTTATGAAAAAAAGGATAATATAGATTTGATAATACTGG AGTTAGGTTTAACTAGGGAAGATGGATTTGAGGTAGTTGAAAAAATAAGAGAAAAGAATGTAGACATTCCTATAGTTATA CTAACTAAAGTAAATACTAGAGATGCCTTTGCAAAGGTAATAAGAGAAGGTATTTCAGATTATATATTAAAACCTTTTGA TAATAAAGTTTTATTAGATAGAATAGTTAAAACTATAAAGGAAAGTAAAGCTAGTAAAGAAGAAGCATCAATAGGGAAGA AATCTAAAGTTCAAAAAATATATATTAGTGAAGATAATGAAAACATTGATAAAGATAAAGAGGAATTTGCTAAAGGAAAA GAAATCGTAGATTTTAATGGTATAGAAGAAGAATTACCAGAAGAGTTTAAAATTTATTTTGTTGATGAATTAAATAAAGC CAAAACAGATAATACAAAAGTTTCTTCTGTTGTATTTACTCTTATAAAAAATACAGATGAGGAAGAAAAAATAGATGTAA AAGAAAGTTATATAACATTAACAGAGGTTTTTTATAAAGGAATAAAGGATATTTTTAAAGCCCCAAATTTTATAACAAAA CATGGATTATTAACTTTTGTAGCTGTATTGCCAAATTGTGATGAAGAGAAAGTTGAAGATATGAAAAATAGAATACAAGA AAAATATAAAATGCTTTCTTTAATTTATCCTCAATTATCACAATATCATGTAGGATACGGAAATGTAACTTATCCTTTAG ATGGAGATACCGTAGAAGCACTTATAGATAAACTTATGGATAAGATGAGAGAGAATATCAAATTAAAAGAATAA
Upstream 100 bases:
>100_bases ATGGACAAATCATAACAATAGATGGAGCTATGTGTTAATTAATATTAAATATAAAGATTCCAAAGTATAAAAAAATAATT TAAATATGAGAGTGATAAGC
Downstream 100 bases:
>100_bases TTGAAAAAATTTTATTGTTATTCCCAATTAAGAAGTAAGCAAAAGCAGGAAAGGCCCCCAGCAATTATTTTGCGGGTAGG CCTTTTATTCATACTAAAAT
Product: response regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Two Component; Chemotaxis Response Regulator; Two-Component System Response Regulatory Protein RprY; Response Regulator Receiver Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTREDGFEVVEKIREKNVDIPIVI LTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIKESKASKEEASIGKKSKVQKIYISEDNENIDKDKEEFAKGK EIVDFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK HGLLTFVAVLPNCDEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDTVEALIDKLMDKMRENIKLKE
Sequences:
>Translated_317_residues MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTREDGFEVVEKIREKNVDIPIVI LTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIKESKASKEEASIGKKSKVQKIYISEDNENIDKDKEEFAKGK EIVDFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK HGLLTFVAVLPNCDEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDTVEALIDKLMDKMRENIKLKE >Mature_317_residues MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTREDGFEVVEKIREKNVDIPIVI LTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIKESKASKEEASIGKKSKVQKIYISEDNENIDKDKEEFAKGK EIVDFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK HGLLTFVAVLPNCDEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDTVEALIDKLMDKMRENIKLKE
Specific function: Member Of The Two-Component Regulatory System Kdpd/Kdpe Involved In The Regulation Of The Kdp Operon. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37028; Mature: 37028
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTRE CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCC DGFEVVEKIREKNVDIPIVILTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIK CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ESKASKEEASIGKKSKVQKIYISEDNENIDKDKEEFAKGKEIVDFNGIEEELPEEFKIYF HHHCCHHHHHCCCHHCEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCHHHCCHHHEEEE VDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK EECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH HGLLTFVAVLPNCDEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDTVEA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCHHHHH LIDKLMDKMRENIKLKE HHHHHHHHHHHCCCCCC >Mature Secondary Structure MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTRE CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCC DGFEVVEKIREKNVDIPIVILTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIK CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ESKASKEEASIGKKSKVQKIYISEDNENIDKDKEEFAKGKEIVDFNGIEEELPEEFKIYF HHHCCHHHHHCCCHHCEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCHHHCCHHHEEEE VDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK EECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH HGLLTFVAVLPNCDEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDTVEA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCHHHHH LIDKLMDKMRENIKLKE HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA