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The map label for this gene is sagD

Identifier: 226947727

GI number: 226947727

Start: 620745

End: 622103

Strand: Direct

Name: sagD

Synonym: CLM_0575

Alternate gene names: NA

Gene position: 620745-622103 (Clockwise)

Preceding gene: 226947726

Following gene: 226947728

Centisome position: 14.94

GC content: 28.48

Gene sequence:

>1359_bases
ATGATAAAATTTTCCCCAAGTTTTAATAATATATTAGAGAATTTTAAATCATTAGCAGGAAATCAAAGTGGTATATTAGA
GGCTGCATGTATGCCTGTAGTTAACTTTGATAGTGATGTGTCTTTAAAAAGCATAACAGGAAATATGCCAGATTATCATA
AACAAGTATTTAATAAAGATGTGTCCATGCAATATCACATAATGGGTTATGGATCTCATTACGAGGAAGCTTTAATTAAA
TATACCGGTGAAAGTATAGAAAGATATTCTAGTATTATGGGACCAACACTATTAAAAGATAAAATTGTATATGAAAGTTA
TAAAGAATTAAGTAAAAACAATAAAGTCATGCCCTTAAAATATATAGACGTATTTACAGAAAATCAAATAAAGAAAGCTA
AGGAATTAAATGTGTCTATTTGTGATAAAAAAGTAGAGGAAGATGACATAATAGGATGGATTAAATGTCCTTCACTATTA
AAAAAAGGTAAAGAAATATATGTACCAGCAAAGATGATGTTTGTAGGCTATGAAGAGGATAAAAATAAAGGTGAGATGAC
TTTTATACCATCCTTTAGTACAGGAACAGCAGCACATAAAAGTTTAAAGAAAGCCCTTTTAAATGCTTTAGTTGAGTATA
TTCAAATTGATTCTTTTATGATTAATTGGCATACAAAAGGAAAATGTTCTTTAGTGAAAATAGATGATGAAAATGTGCTT
AAAGTTTTGGAAGATGTAAATTTAGGAGAAAATTCTCCCTATGAAATAATACCTTTATATATGTCTTTGGAGGAATGTCC
TATACATAATTTTGGGGTTTTCTTAAGAAGAAAGGATAATAAATTGCCGTATTTATTATTTGGTATACAAGGGGGACTGG
ATGCCTCCCATGCCTTAACTAGAGGAATAATGGAAGCAGCTTCAATATCCTATGGAGCATATTTTAATGCAATTTACAAC
AAAAATATGTTAGATAATGTAATGAAATATGATCATAAATTTTTAGATTTAGATTCAAATGTGCTATATTATTCTCTCCC
AAATAAAATTGAAGAAAAAAATAAATTAGTAGAATATTTTATAGGAGATGAAATTACCCTAAGTTCTTTAAATAAATTAA
ATATAAAAAGTGTAGATGAACAAATAAAAACTTTATTAAATTATTTAAAGGATATAAGTGAATATGCAGTATATTTAGAT
TTAACTCCACCAGAAACTAGGGACAAGGGGTGGTATGTTATGAGAGTTATGATTCCGGAATTAATTGAAATGTGTATACC
GGAGTTTCCTTTTGAAAACCATCCAAGAATGAAAAAATATGGAGGGGCAATCAATGAATATCCGCACCCAATGCCTTAA

Upstream 100 bases:

>100_bases
AAATATATCAAAGGCTAAATTGAAAGAAATAAACATATCTACTAGGAATATTGTGGATGGAATTTTAGAAGATATTAATT
CTTAACTAGGAGGCTTTAAC

Downstream 100 bases:

>100_bases
TTTATTAATATTATTAGTTACATTTAATCCAATAGTATTAGCTCAGTTATTTTTAAATAATGAAAAATCCTATAATGAAT
CTTTAAAAAGAAGTTTTAAA

Product: streptolysin associated protein SagD

Products: NA

Alternate protein names: Streptolysin S Biosynthesis Protein; Streptolysin S Biosynthesis Protein D; YcaO-Like Protein; YcaO-Like Family

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFDSDVSLKSITGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIK
YTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLL
KKGKEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
KVLEDVNLGENSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYN
KNMLDNVMKYDHKFLDLDSNVLYYSLPNKIEEKNKLVEYFIGDEITLSSLNKLNIKSVDEQIKTLLNYLKDISEYAVYLD
LTPPETRDKGWYVMRVMIPELIEMCIPEFPFENHPRMKKYGGAINEYPHPMP

Sequences:

>Translated_452_residues
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFDSDVSLKSITGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIK
YTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLL
KKGKEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
KVLEDVNLGENSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYN
KNMLDNVMKYDHKFLDLDSNVLYYSLPNKIEEKNKLVEYFIGDEITLSSLNKLNIKSVDEQIKTLLNYLKDISEYAVYLD
LTPPETRDKGWYVMRVMIPELIEMCIPEFPFENHPRMKKYGGAINEYPHPMP
>Mature_452_residues
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFDSDVSLKSITGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIK
YTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLL
KKGKEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
KVLEDVNLGENSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYN
KNMLDNVMKYDHKFLDLDSNVLYYSLPNKIEEKNKLVEYFIGDEITLSSLNKLNIKSVDEQIKTLLNYLKDISEYAVYLD
LTPPETRDKGWYVMRVMIPELIEMCIPEFPFENHPRMKKYGGAINEYPHPMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51889; Mature: 51889

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFDSDVSLKSITGNMPDYHKQVFNKD
CEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCEECCCCCCEEHHHCCCCCHHHHHHHCCC
VSMQYHIMGYGSHYEEALIKYTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLK
CCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEE
YIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLLKKGKEIYVPAKMMFVGYEED
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECHHHHHCCCEEEECEEEEEEEECCC
KNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHH
KVLEDVNLGENSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALT
HHHHHCCCCCCCCCEEEEEEEEHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHH
RGIMEAASISYGAYFNAIYNKNMLDNVMKYDHKFLDLDSNVLYYSLPNKIEEKNKLVEYF
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHH
IGDEITLSSLNKLNIKSVDEQIKTLLNYLKDISEYAVYLDLTPPETRDKGWYVMRVMIPE
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEHHHHHH
LIEMCIPEFPFENHPRMKKYGGAINEYPHPMP
HHHHHCCCCCCCCCCCHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFDSDVSLKSITGNMPDYHKQVFNKD
CEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCEECCCCCCEEHHHCCCCCHHHHHHHCCC
VSMQYHIMGYGSHYEEALIKYTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLK
CCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEE
YIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLLKKGKEIYVPAKMMFVGYEED
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECHHHHHCCCEEEECEEEEEEEECCC
KNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHH
KVLEDVNLGENSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALT
HHHHHCCCCCCCCCEEEEEEEEHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHH
RGIMEAASISYGAYFNAIYNKNMLDNVMKYDHKFLDLDSNVLYYSLPNKIEEKNKLVEYF
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHH
IGDEITLSSLNKLNIKSVDEQIKTLLNYLKDISEYAVYLDLTPPETRDKGWYVMRVMIPE
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEHHHHHH
LIEMCIPEFPFENHPRMKKYGGAINEYPHPMP
HHHHHCCCCCCCCCCCHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA