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The map label for this gene is yqhO [H]

Identifier: 226947675

GI number: 226947675

Start: 568625

End: 569557

Strand: Reverse

Name: yqhO [H]

Synonym: CLM_0521

Alternate gene names: 226947675

Gene position: 569557-568625 (Counterclockwise)

Preceding gene: 226947681

Following gene: 226947671

Centisome position: 13.71

GC content: 28.62

Gene sequence:

>933_bases
GTGAAGTGTAATGCTGTATTGGATAGTGGTGGTATTAGAGGTATTGGTATAATTGGTGCTCTGAACCATATGGAAAATAA
AGGTTTTACCTGGAATAACATTGCTGGAACTTCTGTTGGTGCTTTAATAGGAGCATTATTAGCTTCAGGGTATACTGCAA
AAGATTTAAAACATATAACTGCAAATACAAATTTTATGGAACTTCTTAATAAGGAAGGTATTCAAAAATCTACATTTGTT
GGTAAAGCAATAAATTTCTTTAAATTTAATGGAGTTTACTCTGGAGATTTTATGGAAAAATGGATTGATGATATGCTTAA
AGTTAAAGGAATAAATACTTTTAGTGACCTTATGGATAATGATACTTGTAAACTAAAAATAATAGCTTCAGATATCACTG
AAAAAAGAATGATTACCTTCCCTGATGATCTTTATATTTATGGATTCAGCTTAAGTAATTTTAGAGTTTCTAAAGCCATT
AGAATGAGTGTAAGTATACCATTTTTCTTCAAGCCTGTAGAATTTATCCATGGTGATGGTTTAAGTTATATAGTAGATGG
TGGTGTTTGCTGTGCTTATCCAATTTCTATATTTGATAATTACAATGATAAAGAAGATATACCTACAATAGGTTTTAAAT
TTGATAATATTGAATTAAGTAATACCAAACAGGGTAAAAACGAACCCCTATCTTTTCTATTTGACATAGCTGATACCATG
AATAAAAAAGATTCTAAAGAATGGATGACAGATAAAAATATAGATAGAACTATACTAATTCCTACCTTAGGAATTAGCTC
TACAGACTTTGATTTATCTAAAGAAAAAACTTTAAAACTATATAAATCTGGATATAAATCCGCTGAAAAATTTCTTAAAA
CCTGGGATTTTGCAAAATATAAAAATAAGTATAAAAAAGAAGGTACTGCTTAG

Upstream 100 bases:

>100_bases
AATAAATAAAAATTTCCTTATATTGTATTTTTATTGTATAATCTATATAGGGATTTGTTAGGATTAGCTCATATATAGTT
AAATTAAGGGAGGGCTCTAT

Downstream 100 bases:

>100_bases
ATATAATTAGATTATATCTAAATTTATATAAAATAAAAACTAAAGTATTTCTAATCTTTAAAGTAATACTTGTATAAGCT
GTATTATTAATCTTTAAATA

Product: phospholipase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGALLASGYTAKDLKHITANTNFMELLNKEGIQKSTFV
GKAINFFKFNGVYSGDFMEKWIDDMLKVKGINTFSDLMDNDTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAI
RMSVSIPFFFKPVEFIHGDGLSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNTKQGKNEPLSFLFDIADTM
NKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLYKSGYKSAEKFLKTWDFAKYKNKYKKEGTA

Sequences:

>Translated_310_residues
MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGALLASGYTAKDLKHITANTNFMELLNKEGIQKSTFV
GKAINFFKFNGVYSGDFMEKWIDDMLKVKGINTFSDLMDNDTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAI
RMSVSIPFFFKPVEFIHGDGLSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNTKQGKNEPLSFLFDIADTM
NKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLYKSGYKSAEKFLKTWDFAKYKNKYKKEGTA
>Mature_310_residues
MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGALLASGYTAKDLKHITANTNFMELLNKEGIQKSTFV
GKAINFFKFNGVYSGDFMEKWIDDMLKVKGINTFSDLMDNDTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAI
RMSVSIPFFFKPVEFIHGDGLSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNTKQGKNEPLSFLFDIADTM
NKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLYKSGYKSAEKFLKTWDFAKYKNKYKKEGTA

Specific function: Probable lipid hydrolase [H]

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 34852; Mature: 34852

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGALLASGYTAKDLKHIT
CCCCEEECCCCCCEEEHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH
ANTNFMELLNKEGIQKSTFVGKAINFFKFNGVYSGDFMEKWIDDMLKVKGINTFSDLMDN
CCCHHHHHHHHCCCCHHHHHHHHHHEEEECCEECCHHHHHHHHHHHHHCCCCHHHHHHCC
DTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAIRMSVSIPFFFKPVEFIHGDG
CCEEEEEEECCCCCCCEEECCCCEEEEEEEECCEEECEEEEEEEECCEEECCHHHHCCCC
LSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNTKQGKNEPLSFLFDIADTM
CEEEECCCEEEEEHHHHHCCCCCCCCCCEECEEECCEEECCCCCCCCCCHHHHHHHHHHH
NKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLYKSGYKSAEKFLKTWDFAKY
CCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNKYKKEGTA
HHHHHCCCCC
>Mature Secondary Structure
MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGALLASGYTAKDLKHIT
CCCCEEECCCCCCEEEHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH
ANTNFMELLNKEGIQKSTFVGKAINFFKFNGVYSGDFMEKWIDDMLKVKGINTFSDLMDN
CCCHHHHHHHHCCCCHHHHHHHHHHEEEECCEECCHHHHHHHHHHHHHCCCCHHHHHHCC
DTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAIRMSVSIPFFFKPVEFIHGDG
CCEEEEEEECCCCCCCEEECCCCEEEEEEEECCEEECEEEEEEEECCEEECCHHHHCCCC
LSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNTKQGKNEPLSFLFDIADTM
CEEEECCCEEEEEHHHHHCCCCCCCCCCEECEEECCEEECCCCCCCCCCHHHHHHHHHHH
NKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLYKSGYKSAEKFLKTWDFAKY
CCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNKYKKEGTA
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]