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The map label for this gene is 226947664

Identifier: 226947664

GI number: 226947664

Start: 551849

End: 552499

Strand: Direct

Name: 226947664

Synonym: CLM_0508

Alternate gene names: NA

Gene position: 551849-552499 (Clockwise)

Preceding gene: 226947662

Following gene: 226947665

Centisome position: 13.28

GC content: 22.89

Gene sequence:

>651_bases
ATGAAAAAAAACTTAACTAAGAAGTATGAAAAACTTCTTTTAGATAATTATAGACGAAATATAGATAATTCTAATTATAA
AGATTTAATATTAGAAGGAATAAGTAGTCATAAAGCTATACATAGATATCTAAAGGATTATATAAAAAATAATAAGGAAG
TCTTGGATTTAAATTGGGGAAAGCAAATGCTTTTGTTTATAATTTCTTTTAATGAAAAGGATCTTGAACTAGCAGAAGTT
TGTTATAAATCATTAAAGAAATATCCAGATAATTATTTTACAGAATCCGTAATGGCAGATATTAATTTAAGATTTTATGG
AAATTTGTTTAAAGCTAGAGATAAATATTTAAATGCTTTAAGTTTATATGATAGAGATGCGCTTGTGTACTACAACTTAG
GGCTAATATATTATTTATTAGGTATGTTCGAAAAGAGTATGGATTTTTATAATAAGAGCTTAAACTACATAAATAAGATG
GATAATAAAGAATTTATAAAATCTAAATGTTTATATAACATAGCAGTTTGCGAGATTAATTATAATAATAATTATAAAGA
AGGAGAAAAGCTGCTTAAAAGAAGTTTAAAATTAAATCCGCATTATAAGGAAGCAAATGATTTATTAGAAAAATTAAGAG
GTGAAAAATAG

Upstream 100 bases:

>100_bases
ATAATTACAAAAATATATAAAATTTTGCATGTAAATGAAGAAATATTGTATACTTATATGTGTTATATTATTTATTTTGA
AGGGAGAATAATGGGTAGGA

Downstream 100 bases:

>100_bases
TCATGATGCCAAAGCAAAAGGAGTTATGGATACCTAATGATGAGGTAGCAGAAAAAATAATATTAATACAAATAGAATGT
TCTTTAAATGAAAACTATGA

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKNLTKKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEV
CYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNALSLYDRDALVYYNLGLIYYLLGMFEKSMDFYNKSLNYINKM
DNKEFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK

Sequences:

>Translated_216_residues
MKKNLTKKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEV
CYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNALSLYDRDALVYYNLGLIYYLLGMFEKSMDFYNKSLNYINKM
DNKEFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK
>Mature_216_residues
MKKNLTKKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEV
CYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNALSLYDRDALVYYNLGLIYYLLGMFEKSMDFYNKSLNYINKM
DNKEFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25963; Mature: 25963

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLTKKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KQMLLFIISFNEKDLELAEVCYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNAL
CEEEHEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLYDRDALVYYNLGLIYYLLGMFEKSMDFYNKSLNYINKMDNKEFIKSKCLYNIAVCEIN
HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEEE
YNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKNLTKKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLKDYIKNNKEVLDLNWG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KQMLLFIISFNEKDLELAEVCYKSLKKYPDNYFTESVMADINLRFYGNLFKARDKYLNAL
CEEEHEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLYDRDALVYYNLGLIYYLLGMFEKSMDFYNKSLNYINKMDNKEFIKSKCLYNIAVCEIN
HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEEE
YNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA