Click here to switch to the map view.

The map label for this gene is 226947663

Identifier: 226947663

GI number: 226947663

Start: 551047

End: 551538

Strand: Reverse

Name: 226947663

Synonym: CLM_0507

Alternate gene names: NA

Gene position: 551538-551047 (Counterclockwise)

Preceding gene: 226947666

Following gene: 226947661

Centisome position: 13.27

GC content: 29.88

Gene sequence:

>492_bases
ATGTTTAATTATTATAACCCTTGCTCTATGTTCATGCCTGTCCCTTTTTATCTTAAAGGCTCACACCCAATGATGTACCC
AATGGTACCTATGGAATATGATTGTGAAGATGAAAATGATGATGATTTAAATCGCTTACATCCAAGAATTTATTTTAAAA
TCTATCCTTTAGTAAAAAAACATTGTGACATAATGGAAAAAGAAAAGGGTAAAGACTATTGTCCTTGTGAGAAAGAACTA
GATGATGCTTGTAAAGAAATTTATGAAAGAATAAAGTCTCATTTAGATGATGATGATGATGATTACTGTAGGCAACGTCG
TTATAGAAGACGTAATGCTATAGGGGATCTTATAAGAATAATATTTATAAGTGAACTTTTTGACAGAAGAAGGAGAAGGA
GAAGAAGGAGAAGAAGAAGAAGATATTATGGTTATAATCCTAATTACAATTATAACTATAATTATGATGATTTTGACGAT
TATGATGATTAA

Upstream 100 bases:

>100_bases
TAATATTAAATGTACTTCATTATCAGATACACTCTTATTATTAACACTTATTTATTTTCTGCATAGAATAAAGTGTGTTT
ATTTTATAGGAGGTTCATAA

Downstream 100 bases:

>100_bases
TATTCCTCACTAATTATCCTTTTTAAGGAACATAAAAAACACTTTCCACAAATTTAATAAAGAGTTTATTAATAAAACTA
TACTATTAATAAACTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MFNYYNPCSMFMPVPFYLKGSHPMMYPMVPMEYDCEDENDDDLNRLHPRIYFKIYPLVKKHCDIMEKEKGKDYCPCEKEL
DDACKEIYERIKSHLDDDDDDYCRQRRYRRRNAIGDLIRIIFISELFDRRRRRRRRRRRRRYYGYNPNYNYNYNYDDFDD
YDD

Sequences:

>Translated_163_residues
MFNYYNPCSMFMPVPFYLKGSHPMMYPMVPMEYDCEDENDDDLNRLHPRIYFKIYPLVKKHCDIMEKEKGKDYCPCEKEL
DDACKEIYERIKSHLDDDDDDYCRQRRYRRRNAIGDLIRIIFISELFDRRRRRRRRRRRRRYYGYNPNYNYNYNYDDFDD
YDD
>Mature_163_residues
MFNYYNPCSMFMPVPFYLKGSHPMMYPMVPMEYDCEDENDDDLNRLHPRIYFKIYPLVKKHCDIMEKEKGKDYCPCEKEL
DDACKEIYERIKSHLDDDDDDYCRQRRYRRRNAIGDLIRIIFISELFDRRRRRRRRRRRRRYYGYNPNYNYNYNYDDFDD
YDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20574; Mature: 20574

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNYYNPCSMFMPVPFYLKGSHPMMYPMVPMEYDCEDENDDDLNRLHPRIYFKIYPLVKK
CCCCCCCHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHH
HCDIMEKEKGKDYCPCEKELDDACKEIYERIKSHLDDDDDDYCRQRRYRRRNAIGDLIRI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IFISELFDRRRRRRRRRRRRRYYGYNPNYNYNYNYDDFDDYDD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFNYYNPCSMFMPVPFYLKGSHPMMYPMVPMEYDCEDENDDDLNRLHPRIYFKIYPLVKK
CCCCCCCHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHH
HCDIMEKEKGKDYCPCEKELDDACKEIYERIKSHLDDDDDDYCRQRRYRRRNAIGDLIRI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IFISELFDRRRRRRRRRRRRRYYGYNPNYNYNYNYDDFDDYDD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA