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The map label for this gene is 226947640

Identifier: 226947640

GI number: 226947640

Start: 516933

End: 517538

Strand: Direct

Name: 226947640

Synonym: CLM_0477

Alternate gene names: NA

Gene position: 516933-517538 (Clockwise)

Preceding gene: 226947639

Following gene: 226947642

Centisome position: 12.44

GC content: 30.69

Gene sequence:

>606_bases
ATGCGTTATAGAGTGGATATACTTTTATTTGATAAGTTTGAAACATTGGATGTATTTGGTCCTGTTGAAATACTTGGGAG
TGTTCCGGAAATTTTTAAATTGAATTTCATATCTCTTAAGGGCGGAATTGTTGAAAGTTCTCAAAATGTAAGGGTAGATA
CAAATTTGTATACCAATGAAAAGAATATAGAAAAAATCCTACTTGTTCCAGGAGGGATTGGAACAAGAGAAAAAGTTGAT
GATAATAATTTTATTAATTTCATTGAAAATATTTCTAATCAATCAAAATATATAATTAGTATATGCACAGGTTCGGCTTT
ACTTGCTAAAACGGGAATACTAAATGGGAAAAAAGCAACAACAAATAAACTCGCATTTAAGTGGGTTACAGAGCAAGGTA
AAGATGTATTATGGGTAAAAGAATCAAGGTGGGTAAAGGACGGTAGCATATATACATCTTCAGGAGTATCTGCTGGAATG
GATATGGCATTAGGTTTTATAGCAGACATTATTGGGAAAACAAAAGCATTAGAGATTAGCCAAAGAATTGAATATTTTTG
GAATGAAGATAGTAAATATGATCCATTTTCTAAAATGTATGAATAA

Upstream 100 bases:

>100_bases
TAGAAATAAAGAAATGGATAAAAAATTAGATATTATTATGAGTAAATTGGAAAATAAACAAAATAATTAGACCTTATGTG
AAATGGGAGGGGATAATAAT

Downstream 100 bases:

>100_bases
TTTATTTATATAAAATGTTTGATATAGAATGTTTTTACGAACTGTATTAGTGGTGTTGAGTGAATTTACCGAATAACGTG
AATTTTGTTATATATTTTTT

Product: DJ-1/PfpI family protein

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family Protein; AraC Family Transcription Regulator; DJ-1/PfpI Family; Transcriptional Regulator DarR; AraC Family Regulatory Protein; ThiJ/PfpI; Isonitrile Hydratase; Intracellular Protease/Amidase; AraC-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Arac Family; Cyclohexyl-Isocyanide Hydratase; Hydratase; ADPA-Family Transcriptional Regulator; ADPA Family Transcriptional Regulator; Transcriptional Regulator AraC Type; AraC/XylS Family Transcriptional Regulator; Intracellular Protease/Amidase Protein; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator AraC Family Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; ThiJ Family Protein; Transcription Regulator Protein Thij/Pfpi; AraC Family Transcription Regulator Protein; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRYRVDILLFDKFETLDVFGPVEILGSVPEIFKLNFISLKGGIVESSQNVRVDTNLYTNEKNIEKILLVPGGIGTREKVD
DNNFINFIENISNQSKYIISICTGSALLAKTGILNGKKATTNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGM
DMALGFIADIIGKTKALEISQRIEYFWNEDSKYDPFSKMYE

Sequences:

>Translated_201_residues
MRYRVDILLFDKFETLDVFGPVEILGSVPEIFKLNFISLKGGIVESSQNVRVDTNLYTNEKNIEKILLVPGGIGTREKVD
DNNFINFIENISNQSKYIISICTGSALLAKTGILNGKKATTNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGM
DMALGFIADIIGKTKALEISQRIEYFWNEDSKYDPFSKMYE
>Mature_201_residues
MRYRVDILLFDKFETLDVFGPVEILGSVPEIFKLNFISLKGGIVESSQNVRVDTNLYTNEKNIEKILLVPGGIGTREKVD
DNNFINFIENISNQSKYIISICTGSALLAKTGILNGKKATTNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGM
DMALGFIADIIGKTKALEISQRIEYFWNEDSKYDPFSKMYE

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22659; Mature: 22659

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRVDILLFDKFETLDVFGPVEILGSVPEIFKLNFISLKGGIVESSQNVRVDTNLYTNE
CEEEEEEEEECCCCEECCCCHHHHHCCCCHHHEEEEEEECCCEEECCCCEEEECEEEECC
KNIEKILLVPGGIGTREKVDDNNFINFIENISNQSKYIISICTGSALLAKTGILNGKKAT
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCC
TNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGMDMALGFIADIIGKTKALEIS
CCCEEEEEECCCCCEEEEEECCCEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEHH
QRIEYFWNEDSKYDPFSKMYE
HHHHHHCCCCCCCCCHHHHCC
>Mature Secondary Structure
MRYRVDILLFDKFETLDVFGPVEILGSVPEIFKLNFISLKGGIVESSQNVRVDTNLYTNE
CEEEEEEEEECCCCEECCCCHHHHHCCCCHHHEEEEEEECCCEEECCCCEEEECEEEECC
KNIEKILLVPGGIGTREKVDDNNFINFIENISNQSKYIISICTGSALLAKTGILNGKKAT
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCC
TNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGMDMALGFIADIIGKTKALEIS
CCCEEEEEECCCCCEEEEEECCCEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEHH
QRIEYFWNEDSKYDPFSKMYE
HHHHHHCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA