Click here to switch to the map view.

The map label for this gene is 226947629

Identifier: 226947629

GI number: 226947629

Start: 503820

End: 504167

Strand: Reverse

Name: 226947629

Synonym: CLM_0465

Alternate gene names: NA

Gene position: 504167-503820 (Counterclockwise)

Preceding gene: 226947632

Following gene: 226947623

Centisome position: 12.13

GC content: 25.29

Gene sequence:

>348_bases
TTGAAAAAAAAATTAATATTAATAATATGTATTTTGTTTTTATTATTTTTGCCCTTAAGCTATAAATATAAAATTTACAA
AAATAAAGACTTAAGTTATGTAGTTGAACAACATATGACTCATGGTTTATTTAATAAATATAAAATGCATTCTATTAACA
GCCTTAACCTAACTTTTTCTGACGGCAATATAGCTGTTGTAAAAGTCTATGGAACTAGTAATAGTTCTCCACATAAAAGT
ATATCCTACAATTTATTCCTTACTAAAAGCAAAAATGGAGCATGGAAGGTAAAAAAAATATCTGAGAATTACAAGTATTC
AAAAGAAAAAACCCCAGATGCGCCTTAA

Upstream 100 bases:

>100_bases
CAAACAATGCTTAAGATAGAATTTAAATATATGTATTTATTTACTTTTATTTCAAGATAAGGTAAAATTATATTATCATA
TCGATATAGGGAGGTCTGTT

Downstream 100 bases:

>100_bases
TGCTTTTTCTCTTTTATACAATTATATTTTACACAGTTTTCACATACACCTTCTATTTTTAAATGATGATCAATATTAGA
AAATCCAGTTTCTTTGTTTA

Product: exported protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKKKLILIICILFLLFLPLSYKYKIYKNKDLSYVVEQHMTHGLFNKYKMHSINSLNLTFSDGNIAVVKVYGTSNSSPHKS
ISYNLFLTKSKNGAWKVKKISENYKYSKEKTPDAP

Sequences:

>Translated_115_residues
MKKKLILIICILFLLFLPLSYKYKIYKNKDLSYVVEQHMTHGLFNKYKMHSINSLNLTFSDGNIAVVKVYGTSNSSPHKS
ISYNLFLTKSKNGAWKVKKISENYKYSKEKTPDAP
>Mature_115_residues
MKKKLILIICILFLLFLPLSYKYKIYKNKDLSYVVEQHMTHGLFNKYKMHSINSLNLTFSDGNIAVVKVYGTSNSSPHKS
ISYNLFLTKSKNGAWKVKKISENYKYSKEKTPDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13329; Mature: 13329

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLILIICILFLLFLPLSYKYKIYKNKDLSYVVEQHMTHGLFNKYKMHSINSLNLTFS
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEC
DGNIAVVKVYGTSNSSPHKSISYNLFLTKSKNGAWKVKKISENYKYSKEKTPDAP
CCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKLILIICILFLLFLPLSYKYKIYKNKDLSYVVEQHMTHGLFNKYKMHSINSLNLTFS
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEC
DGNIAVVKVYGTSNSSPHKSISYNLFLTKSKNGAWKVKKISENYKYSKEKTPDAP
CCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA