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The map label for this gene is yheN [H]

Identifier: 226947582

GI number: 226947582

Start: 441595

End: 442407

Strand: Direct

Name: yheN [H]

Synonym: CLM_0419

Alternate gene names: 226947582

Gene position: 441595-442407 (Clockwise)

Preceding gene: 226947581

Following gene: 226947583

Centisome position: 10.63

GC content: 26.57

Gene sequence:

>813_bases
ATGGAGAAAAAAAATAAGATTTTGTTGACAACAATATGTATTCTGCTTTTTGTAGTAGGTTTTTTTGTCACAAAAAACAT
AATAGATAAAAATAATGAAAAACAAGTTATGAAAAAAGAAATGATTAACGATAATAGTAAAACGGCAATTAAACAAATGG
ATGATAAGATAGTGTTTAGTGAATATATAAAGGATAAGTATGATGCTAAACAGGTATTTCAGAAGGATGGTAAGAAAATA
GCCTTTTTAACCTTTGATGATGGACCAAGCTATCTAACTAATGATATATTAGATATATTAAAAAAATACCATATAAAGGC
TACTTTTTTTGTAGTGGGAAACTTAGCAAAGGAGAACAAAAATTTAATAGAAAGACAAATTAAAGAGGGACATTCTATAG
GTAATCATACCTATACTCATGACTATAAAAATATTTACTCTAGTGTAGATGTTTTTGTAAATGAAGTAGATAAAACTCAA
AATGTTATAAAATCTATAGTAGGATCTAACTATGATATAAAACTAGTAAGATTTCCAGGGGGATCCTTTGGGGATAGATT
AAATCCTTATAAAGAGGCTATAAAAAATAAGGGTTATTATAATATGGATTGGAATGCTTTAAATGGAGATGCAGAAGGAA
ATAATATACCAAAAGAAAAATTAATACAGAATATAAAGAATACTATTGAAGGAAAAAATCATGTGGTTGTACTAATGCAT
GATTGTGCAGCTAAAAAAACTACTGTAGAAGCATTACCAGATATAATAGAGTATTTAATATCACAAGGATATGAATTCAA
AGCTTTAAAATAG

Upstream 100 bases:

>100_bases
TGAAATAGTTATTATTTATTAATATATTTTAATAAGTTTGTAACCCAAAATCCTATTTAAATTAGTATTATTATAATGAA
AGTTTTTGGAGGCTGTTAAT

Downstream 100 bases:

>100_bases
TATGTATCATATATCTTAAATTATAGTTAAAAGTTGTAAAAAAGGTGAGTTTTACAATATACTAAAGATATTAAAGTGGA
ATACTAAAACAAAATTGAGG

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKTAIKQMDDKIVFSEYIKDKYDAKQVFQKDGKKI
AFLTFDDGPSYLTNDILDILKKYHIKATFFVVGNLAKENKNLIERQIKEGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQ
NVIKSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKNKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
DCAAKKTTVEALPDIIEYLISQGYEFKALK

Sequences:

>Translated_270_residues
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKTAIKQMDDKIVFSEYIKDKYDAKQVFQKDGKKI
AFLTFDDGPSYLTNDILDILKKYHIKATFFVVGNLAKENKNLIERQIKEGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQ
NVIKSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKNKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
DCAAKKTTVEALPDIIEYLISQGYEFKALK
>Mature_270_residues
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKTAIKQMDDKIVFSEYIKDKYDAKQVFQKDGKKI
AFLTFDDGPSYLTNDILDILKKYHIKATFFVVGNLAKENKNLIERQIKEGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQ
NVIKSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKNKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
DCAAKKTTVEALPDIIEYLISQGYEFKALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30979; Mature: 30979

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKTAIKQMDDKIVFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EYIKDKYDAKQVFQKDGKKIAFLTFDDGPSYLTNDILDILKKYHIKATFFVVGNLAKENK
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHH
NLIERQIKEGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQNVIKSIVGSNYDIKLVRFPG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GSFGDRLNPYKEAIKNKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
DCAAKKTTVEALPDIIEYLISQGYEFKALK
CCCCHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKTAIKQMDDKIVFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EYIKDKYDAKQVFQKDGKKIAFLTFDDGPSYLTNDILDILKKYHIKATFFVVGNLAKENK
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHH
NLIERQIKEGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQNVIKSIVGSNYDIKLVRFPG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GSFGDRLNPYKEAIKNKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
DCAAKKTTVEALPDIIEYLISQGYEFKALK
CCCCHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]