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The map label for this gene is yufP [H]

Identifier: 226947442

GI number: 226947442

Start: 256217

End: 257320

Strand: Direct

Name: yufP [H]

Synonym: CLM_0271

Alternate gene names: 226947442

Gene position: 256217-257320 (Clockwise)

Preceding gene: 226947441

Following gene: 226947443

Centisome position: 6.17

GC content: 32.79

Gene sequence:

>1104_bases
GTGAGTGAAAATAACAAAAAAAGAACCATAAGTAATGGTCTTATAAATGTTTTAAAATCCTTAGCATTTCCACTTGGTGC
AATTGTAATTTCTATATTCGTATCTGTTTTCTTTGTTATGTGGGCAAAGGGATACTCAATAACTCAATATTTTTCAGCTT
TTAGTGATCTTTTCACTACTATATGGCAAGGAAGCTTTGGAGATAAAAGAAAAACTCTTGAAACAATGATATATGTTACC
CCTTTAATATTTACAGGAGTAGCTAATGCTATAGCCTTTAGATGTGGATTATTTAATATAGGGGTTGAAGGACAGTTTAT
AGTAGGTATGATATCTGCAGCAGTTCTAGGACTTATTCCAGGCTTGAATCCAGTTGTACATGGAATATTAATAATATTAG
GTGGAATAGTAGCGGGCTCTATTTGGGGAGGAATACCAGGATATTTAAAAGCTAAGGTAGGAACAAATGAAGTTATAAAC
ACAATAATGATGAATTATTTAGGATTATATTTGGGAAATTATATAATATTAAGATCTAGATTTTCGGTTAAAAGTTCAGC
TAGTACACCTATAATTCAAAAGAGTGCTCAATTACTAAGATTCAGTAGCACTAGTAGAGCAAGTATAAGTCTAATAATAG
GAATAGTGTTTGCTATATTCGTATACTGGCTCTTATGGAAAACTACTGTAGGATATGAGATAAGAGCAGTTGGATTTAAT
CCATCTGGAGCTGAGTATGGCGGAATTAATGTAGCTAAAAATACAATTTTAGCTATGGTTTTATCAGGAGCTATTGCAGG
TATAGGTGGAGCTACCCATGTAGCAGGTGTTATGCATCAAGCGCAAGATATGATGGTATTACCTGGATTTGGCTTTGATG
GTATAGCCGTTGCCCTACTGGCTAAAAATAATCCTATAGGGTGTATAGCTTCTGCTATATTATTTGGAGCATTAAACAGT
AGTTCTAAGATGCTTCAACTTAATGGCATACCAAAACAAATAGTTTACCTTGTTCAATCAATAATAATAATATTTGTAGC
AACTGATTATATAGTAAAATATTTCTCAGAGAAAAAGAATAGGAAGGTGTTAATCAATGGATAG

Upstream 100 bases:

>100_bases
ATAATAGAAATATTAGATAGAAAAGATGCCACAGAGCAAAAATTAGGTGTGTTAATGGCTGGTGGTAAATTAGAGGATAC
TAGGAAAGAGGTGAAATAAG

Downstream 100 bases:

>100_bases
TTTAATCATAATAGGATTAGTAACAGCTACATTAAGGACAGCTACACCTTTGGTTTTTGCAGGTCTCGGAGGAGTATTTT
CAGAAAGAGCTGGTGTAGTT

Product: sugar ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYSITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVT
PLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVIN
TIMMNYLGLYLGNYIILRSRFSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMVLPGFGFDGIAVALLAKNNPIGCIASAILFGALNS
SSKMLQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKNRKVLING

Sequences:

>Translated_367_residues
MSENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYSITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVT
PLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVIN
TIMMNYLGLYLGNYIILRSRFSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMVLPGFGFDGIAVALLAKNNPIGCIASAILFGALNS
SSKMLQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKNRKVLING
>Mature_366_residues
SENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYSITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVTP
LIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINT
IMMNYLGLYLGNYIILRSRFSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFNP
SGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMVLPGFGFDGIAVALLAKNNPIGCIASAILFGALNSS
SKMLQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKNRKVLING

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39393; Mature: 39262

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYSITQYFSAFSDLFTT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IWQGSFGDKRKTLETMIYVTPLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIP
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCC
GLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINTIMMNYLGLYLGNYIILRSR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEC
FSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMVLPGFGFDGIAVALL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCHHEEEEE
AKNNPIGCIASAILFGALNSSSKMLQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKN
ECCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RKVLING
CEEEECC
>Mature Secondary Structure 
SENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGYSITQYFSAFSDLFTT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IWQGSFGDKRKTLETMIYVTPLIFTGVANAIAFRCGLFNIGVEGQFIVGMISAAVLGLIP
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCC
GLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINTIMMNYLGLYLGNYIILRSR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEC
FSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVYWLLWKTTVGYEIRAVGFN
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQAQDMMVLPGFGFDGIAVALL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCHHEEEEE
AKNNPIGCIASAILFGALNSSSKMLQLNGIPKQIVYLVQSIIIIFVATDYIVKYFSEKKN
ECCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RKVLING
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]