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The map label for this gene is yhbA [H]

Identifier: 226947428

GI number: 226947428

Start: 240252

End: 241217

Strand: Direct

Name: yhbA [H]

Synonym: CLM_0257

Alternate gene names: 226947428

Gene position: 240252-241217 (Clockwise)

Preceding gene: 226947427

Following gene: 226947429

Centisome position: 5.78

GC content: 27.95

Gene sequence:

>966_bases
ATGGATTGTAAGGAGTCTGTAAAAGAATATTGCAGAAATTTAGGATTGAATTTAATAGGATTCACAAAATGTAGGATTTT
TCATGAGCTTATACCAGAGCTCACAGAAAGAAAAAATGAAAATAGACAAAATGAATTTGAAGGTAAAGATATAAATAAAA
GAGTGGATCCATTTCAATATATGAAAGAGGGAAAAACAATAATTTCTATTGCTTTTCCCTATTTATTTAATTTAGGTCAT
AAACATGATGTATATTTTTCTAAGTATACTCAGGGTAGAGATTATCATACTGTAGTAAATGAATATTTACAAAAGATATG
CAATTTTATACAAAGCAAAGGTTATAGAGCAGAATATTTTGTAGATAGCAACGATCTGCCAGAAAGATATATTGCCTATT
TATGTGGTATAGGATTTATAGGAAAAAATAATATGCTTATTACAGAAAAATATGGTTCTTATGTATTTTTAGGTGAAATA
ATTACGGATATGGAAATCGATGAGGATCAACCAATGGAGTGTAAGTGCGAGGAGTGCAATATATGTCTTAGAGCTTGTCC
AACTAATTCCTTAGAGCATAAAGATCCCAATATATGTTTATCTTACATTACTCAAAAAAAGAATATAGAGGATGATTGGT
TTAATAAATTAAAGGGGAGAATGTTTGGCTGTGATACTTGTCAAAGGGTATGCCCTTACAATAGGAATATAAACACCTCT
AACATAGAAGGATTTAAGACTTTTGATTTTATGGAAAATTTAGATTTAGAAGAGTTAATATATGTTAACAATAAAGAGTT
TAAAGAAAAATATAAACTAACATCCTGTGGATGGAGAGGAAAGAGTATATTGCAAAGAAATGCTTTAATTAATTGTATTA
CAATGAATAAAGATGTAGATATACAGGGAAAAAACATAAAATCTCCCTATGTATTAGATTATTATCATAGACTTTTAAAG
AAATAA

Upstream 100 bases:

>100_bases
TGAAAAAAAGTCATCCGTTATAGAAATAAGAGACTACAATGGTGTTAAAAAAGTAATATACAATGATATGATAATATAGT
TTTTGGGAGAAAAGATTAAT

Downstream 100 bases:

>100_bases
TAATTATAATTTATTTAGAACAGTATTTATAAAGAGAAACTTAATTTAAATTGAGTTCTTATTCTATATAAATTTTAGTT
GAACCATTCTAATTACTTTA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MDCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNEFEGKDINKRVDPFQYMKEGKTIISIAFPYLFNLGH
KHDVYFSKYTQGRDYHTVVNEYLQKICNFIQSKGYRAEYFVDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEI
ITDMEIDEDQPMECKCEECNICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMFGCDTCQRVCPYNRNINTS
NIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGKSILQRNALINCITMNKDVDIQGKNIKSPYVLDYYHRLLK
K

Sequences:

>Translated_321_residues
MDCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNEFEGKDINKRVDPFQYMKEGKTIISIAFPYLFNLGH
KHDVYFSKYTQGRDYHTVVNEYLQKICNFIQSKGYRAEYFVDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEI
ITDMEIDEDQPMECKCEECNICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMFGCDTCQRVCPYNRNINTS
NIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGKSILQRNALINCITMNKDVDIQGKNIKSPYVLDYYHRLLK
K
>Mature_321_residues
MDCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNEFEGKDINKRVDPFQYMKEGKTIISIAFPYLFNLGH
KHDVYFSKYTQGRDYHTVVNEYLQKICNFIQSKGYRAEYFVDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEI
ITDMEIDEDQPMECKCEECNICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMFGCDTCQRVCPYNRNINTS
NIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGKSILQRNALINCITMNKDVDIQGKNIKSPYVLDYYHRLLK
K

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=281, Percent_Identity=28.4697508896797, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 37949; Mature: 37949

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNEFEGKDINKRVDPFQY
CCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
MKEGKTIISIAFPYLFNLGHKHDVYFSKYTQGRDYHTVVNEYLQKICNFIQSKGYRAEYF
HHCCCEEEEEHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
VDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEIITDMEIDEDQPMECKCEECN
ECCCCCHHHHHHHHHCCCEECCCCEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCHHCC
ICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMFGCDTCQRVCPYNRNINTS
EEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCC
NIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGKSILQRNALINCITMNKDVD
CCCCCCHHHHHHCCCHHHEEEECCHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCC
IQGKNIKSPYVLDYYHRLLKK
CCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNEFEGKDINKRVDPFQY
CCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
MKEGKTIISIAFPYLFNLGHKHDVYFSKYTQGRDYHTVVNEYLQKICNFIQSKGYRAEYF
HHCCCEEEEEHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
VDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEIITDMEIDEDQPMECKCEECN
ECCCCCHHHHHHHHHCCCEECCCCEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCHHCC
ICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMFGCDTCQRVCPYNRNINTS
EEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCC
NIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGKSILQRNALINCITMNKDVD
CCCCCCHHHHHHCCCHHHEEEECCHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCC
IQGKNIKSPYVLDYYHRLLKK
CCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]