Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is yqhQ [H]
Identifier: 226947360
GI number: 226947360
Start: 168461
End: 169378
Strand: Direct
Name: yqhQ [H]
Synonym: CLM_0180
Alternate gene names: 226947360
Gene position: 168461-169378 (Clockwise)
Preceding gene: 226947359
Following gene: 226947361
Centisome position: 4.05
GC content: 26.47
Gene sequence:
>918_bases GTGGGGAAAAGTACTAACGTTGGAGGACAAGCAGTTCTAGAAGGGGTAATGATGAGAGGAAAAAATGGTATAGCAACGGC AGTTAGAAAAACAAATGGAGAAATAGTTGTAAATAAAGAAAACTATACACCTTACACTAAAAAAAGTTTTTTCTTTTCTC TACCAATAATAAGAGGCTTTGTATCTCTTATTGAATCTTTAGTAATAGGTATACAAACTTTAAATTATTCTGCATCATTT TTTGAAGAACAAGTTGAAGAGTCTAAATTTGATAAATGGTTTAATAGAACTTTTAAGGATAAAGCAGATAATATTTTAAT TGGAATAACATTACTCATATCTTTTATTATATCTGCAGTAGTATTTTTTATTTTTCCAACCTTTATAGCTAATTTTTTTA AAAAAATATATATACAAAATACCTTATTATTAAATATAATAGAAGGAATAATAAGAATAGCTATATTTTTATTATATATT TTATTAATAAGCAATATGGAAGATATAAAAAGGGTATTTCAGTACCATGGGGCAGAACATAAGACTATATTTTGTTATGA AAATCATATGGATCTAATACCTGAAAATGCTATAAAATTTACAAGATTTCATCCAAGATGTGGAACGAATTTTTTGTTTT TAGTTATGATTGTAAGCATACTTTTGTTTTCACTTACAGGATGGAATAATATATGGCAAAGAATTTTATATAGAATAATA TTATTACCTATAGTTTCAGGGGTAACCTATGAAATTATAAAATGGTTAGGTAAAAGCAATAGTAATTTTGCAAAAATTAT AGCATATCCAGGACTTATGTTACAAAAACTAACAACTAAAGAACCTGACTTAAAGCAATTGGAAGTAGCTATAATGGCTT TAAAAGCAGCAGAGGGAATTGAAAATTCAATGGAGTGA
Upstream 100 bases:
>100_bases AAGAAATCTGACCCAGTAGTATTAATAGGGGCACAAGAGTCTTATGAAGCTAGATGTAGGAAGTGTCATTGTGTTCCAAG ATAAGTAATGAGGTGATTAA
Downstream 100 bases:
>100_bases TGTTAATTTGATATTAAAAGATTTACTAATAGAAGGATATGGCGTTTTAAAAAAAGCATCTATAGATAGCTATCAAATAG ATACTCAACTTTTATTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEIVVNKENYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII LLPIVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLKQLEVAIMALKAAEGIENSME
Sequences:
>Translated_305_residues MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEIVVNKENYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII LLPIVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLKQLEVAIMALKAAEGIENSME >Mature_304_residues GKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEIVVNKENYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASFF EEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYIL LISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRIIL LPIVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLKQLEVAIMALKAAEGIENSME
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 34929; Mature: 34798
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEIVVNKENYTPYTKKSFFFSLPIIRGF CCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLPIVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLKQLEVAIMALKAAEGI HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ENSME HCCCC >Mature Secondary Structure GKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEIVVNKENYTPYTKKSFFFSLPIIRGF CCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLPIVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLKQLEVAIMALKAAEGI HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ENSME HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]