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The map label for this gene is 226947308

Identifier: 226947308

GI number: 226947308

Start: 108840

End: 109673

Strand: Direct

Name: 226947308

Synonym: CLM_0127

Alternate gene names: NA

Gene position: 108840-109673 (Clockwise)

Preceding gene: 226947307

Following gene: 226947309

Centisome position: 2.62

GC content: 22.78

Gene sequence:

>834_bases
TTGCTCTATAATAAGAAAAAACTTGTTTTATTATTTGTAATTTTTGCTTTATCTTTTTCTGTTACAGGATGTAATAGTAT
AGATAAAATGAAGTTAAAATTGGGTCTTAAAAATAATGATTTCGAATATATAAAAGAAAATAAAGTTCAAAAAATAATAA
TACAAAATACTAGAGACAAAGGTTTCAGATTTGTAATTACAGATAAAAAGGCTATAAAAGAACTATATGATATTTTATCT
TCAGCTAAACCAGTAAATACAAAATCTTCTTTGGAACCAGATTATATATTTGAAATGGATGAGGCTGGGAATAAAGCTTA
TAAGTTTAGCTACATAGCTGGATTAGATAAAAAGGAAGCAGGAAACTTATATAGTGGAAATAAGATTTACATAGTATCTA
AAAGAATAGATAATGACATAATAAAAAGTTTTTGGACTATAAGAAAACCCAAAGATTTTAAATATGTATATTACAATTCT
ATAATAGAAGTACTAAAAAAGGAAAATATAAATAAAAATAATAAAGATAAGGTAGGTATAAATATTAAAGATGATGTAGA
TGTTGCTAAATTTATATTATCTACTGATTTAGAAGATTTTAAAACTGATTTGGAAAATAACTTTAGTAATGTAGAACTTA
TTAAAGATAATAATGCCAATCATAACATAGAAGTTAGCGTGGATACAGAAGGTTATAAATCTACTATGTATAAAGCAGTA
ATCAAAATTAATAATAAGAAGAAAAGAACAGAAAAAAAATATTATATTGTAGATGAGTATAAGAATAACAGATGGAATAT
AAATATATATAATGAAAAGCCGGAGAATTTTTAA

Upstream 100 bases:

>100_bases
GGGGAGCATTTTTGTGCATATAAGAACTAAATACACATCAGAAGAAAAGTATGTTATAATGTTGTTATATTTTAATAGAA
TCGTATGGAGGTATAATTAA

Downstream 100 bases:

>100_bases
TAAAAGATTCTTGTAAAACCCCATGCATTGCGTGGGGTTTTGCAAAAAATAAATTAATTATAGGATTAATTTTTAAAATT
ATCTTATTTTTACCTTTTAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILS
SAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEAGNLYSGNKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNS
IIEVLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLENNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV
IKINNKKKRTEKKYYIVDEYKNNRWNINIYNEKPENF

Sequences:

>Translated_277_residues
MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILS
SAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEAGNLYSGNKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNS
IIEVLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLENNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV
IKINNKKKRTEKKYYIVDEYKNNRWNINIYNEKPENF
>Mature_277_residues
MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILS
SAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEAGNLYSGNKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNS
IIEVLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLENNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV
IKINNKKKRTEKKYYIVDEYKNNRWNINIYNEKPENF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32478; Mature: 32478

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDK
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCEEEEEEECCCCC
GFRFVITDKKAIKELYDILSSAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEA
CEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHC
GNLYSGNKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNSIIEVLKKENINKNNKDKVGI
CCEECCCEEEEEEECCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEE
NIKDDVDVAKFILSTDLEDFKTDLENNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV
EECCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHEEEE
IKINNKKKRTEKKYYIVDEYKNNRWNINIYNEKPENF
EEECCCHHCCCCEEEEEEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIKENKVQKIIIQNTRDK
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCEEEEEEECCCCC
GFRFVITDKKAIKELYDILSSAKPVNTKSSLEPDYIFEMDEAGNKAYKFSYIAGLDKKEA
CEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHC
GNLYSGNKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNSIIEVLKKENINKNNKDKVGI
CCEECCCEEEEEEECCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEE
NIKDDVDVAKFILSTDLEDFKTDLENNFSNVELIKDNNANHNIEVSVDTEGYKSTMYKAV
EECCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHEEEE
IKINNKKKRTEKKYYIVDEYKNNRWNINIYNEKPENF
EEECCCHHCCCCEEEEEEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA