Click here to switch to the map view.

The map label for this gene is 226947306

Identifier: 226947306

GI number: 226947306

Start: 106631

End: 107926

Strand: Direct

Name: 226947306

Synonym: CLM_0125

Alternate gene names: NA

Gene position: 106631-107926 (Clockwise)

Preceding gene: 226947305

Following gene: 226947307

Centisome position: 2.57

GC content: 25.39

Gene sequence:

>1296_bases
GTGGCACAAAAAAAGAATTATAGTAGATACTTTATAATATTAGAAGAAGATGAAAAAGGATACTCTTTAGGTGTTGATAA
ATCTGCATCAGGATATGTAAAATTAGAAAATAAAAATGAGAAGTGTAAAATATCTTATTATGTTCAAAATATAAAAAAGC
AATCTTCACCTTACCACATGGTTTTAATATGCAATAAAAAAGGAACCAAAGATATAATAAAAATAGGGGAAATGAACATA
GATGAGTATGGAAGAGCAGACATATGTTATGAATATCCAGTAGACAACATAGGAAATTCTGAAATAAATGCAGATAAAAT
ATCAGGAGCAGCAATAGTAAAATTTATAGATTCAAATATAATATCTGTTATGAGCGGATTCTCAACAACGGACATACCAG
CATGGAAATCATTTAGTATTATAGAAAGTAAGGAAAGAAAAAAGGAAGATATAAAAGAAGAAAAGGTTAATAAAACAATA
TTTGATAAATATGAGGAAACAATAGAAGAAATAAAAATTAAAGATAGTAGTAGTGTCAATAAAGATGGAGATAATAAAAT
AAAATCAGTACAAGAACATAAAGAAAAAAATTTACACAGTGAAATTAAGGAAAAGGATAAAAATATAAAAGAATCTAATG
AAAAAGATTTAGATAGTGAAGATAGAGAAAAGGGTAGAGATATAAAAGAATTTAATGAAAAAGATTTAGATAATGAAGGC
AGGGAAAAAGGTAAAGATATAAAAGAAGCTGATGAAAAAGATTTAGATAGTGAAGACAAAGAAAGAGATAAAGATATAGA
AAAGCCTAATGAAAAAAATTTAGAAAAAACAAAGAAATCTATAGAAAAAAATGAAGATAAAAAAAGAAATAAGCAAAACA
TTCCTGTTGGATTAGAAGGTAAGTATTTTAGATCCTTAGTAGAGGACTTAGACAGTGTAGATAATATAACTGATGAAATA
AAAAATTGTATTTGGTATAAAATAGATGCTAAAAACGAAGATGATATGAGAAATACCTGTAATTATGATAAATTTATGGT
TTTATATAATCCTATGTTAGGATATTATCCTTATATAAAAAAACATGGACATTACATTTTAGGTTATAAGTGTGATATTT
CAGGTAATATGAAATACTTAGTATATGGAATTCCTGGAGACAAGACTAAAGAAGAGCAACCATTTAAAGGTAAATCAGGA
TTTGTCACTTGGATTGAAAACAAAGAAAATAATTTAGGATATTGGCTAATGTTTTATGACTATAAAACTAATAATATATT
AATACCTGTTAAATAG

Upstream 100 bases:

>100_bases
TTGTATATATGATATATTATAATTTAAATAATTAAGTTCACTTTTTGTAAGATAACTCATATATTATATTGAATAATTAT
ATTTGGGGGTACAATAAAAA

Downstream 100 bases:

>100_bases
AGGCATGTTAATACATGTCTCTGTTTTTTATGTTGTTTATTATAATATATTAATATTTTAAGAAGTAATAATAAAATTAT
TTTTAAAGCATATATATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNEKCKISYYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNI
DEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNIISVMSGFSTTDIPAWKSFSIIESKERKKEDIKEEKVNKTI
FDKYEETIEEIKIKDSSSVNKDGDNKIKSVQEHKEKNLHSEIKEKDKNIKESNEKDLDSEDREKGRDIKEFNEKDLDNEG
REKGKDIKEADEKDLDSEDKERDKDIEKPNEKNLEKTKKSIEKNEDKKRNKQNIPVGLEGKYFRSLVEDLDSVDNITDEI
KNCIWYKIDAKNEDDMRNTCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMKYLVYGIPGDKTKEEQPFKGKSG
FVTWIENKENNLGYWLMFYDYKTNNILIPVK

Sequences:

>Translated_431_residues
MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNEKCKISYYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNI
DEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNIISVMSGFSTTDIPAWKSFSIIESKERKKEDIKEEKVNKTI
FDKYEETIEEIKIKDSSSVNKDGDNKIKSVQEHKEKNLHSEIKEKDKNIKESNEKDLDSEDREKGRDIKEFNEKDLDNEG
REKGKDIKEADEKDLDSEDKERDKDIEKPNEKNLEKTKKSIEKNEDKKRNKQNIPVGLEGKYFRSLVEDLDSVDNITDEI
KNCIWYKIDAKNEDDMRNTCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMKYLVYGIPGDKTKEEQPFKGKSG
FVTWIENKENNLGYWLMFYDYKTNNILIPVK
>Mature_430_residues
AQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNEKCKISYYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNID
EYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNIISVMSGFSTTDIPAWKSFSIIESKERKKEDIKEEKVNKTIF
DKYEETIEEIKIKDSSSVNKDGDNKIKSVQEHKEKNLHSEIKEKDKNIKESNEKDLDSEDREKGRDIKEFNEKDLDNEGR
EKGKDIKEADEKDLDSEDKERDKDIEKPNEKNLEKTKKSIEKNEDKKRNKQNIPVGLEGKYFRSLVEDLDSVDNITDEIK
NCIWYKIDAKNEDDMRNTCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMKYLVYGIPGDKTKEEQPFKGKSGF
VTWIENKENNLGYWLMFYDYKTNNILIPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50347; Mature: 50216

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNEKCKISYYVQNIKKQSSPYHM
CCCCCCCCEEEEEEEECCCCCEECCCCCCCCEEEECCCCCCEEEHHHHHHHHHCCCCEEE
VLICNKKGTKDIIKIGEMNIDEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNI
EEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHH
ISVMSGFSTTDIPAWKSFSIIESKERKKEDIKEEKVNKTIFDKYEETIEEIKIKDSSSVN
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
KDGDNKIKSVQEHKEKNLHSEIKEKDKNIKESNEKDLDSEDREKGRDIKEFNEKDLDNEG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCHH
REKGKDIKEADEKDLDSEDKERDKDIEKPNEKNLEKTKKSIEKNEDKKRNKQNIPVGLEG
HHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KYFRSLVEDLDSVDNITDEIKNCIWYKIDAKNEDDMRNTCNYDKFMVLYNPMLGYYPYIK
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCEEEEEECCHHHHHHHHH
KHGHYILGYKCDISGNMKYLVYGIPGDKTKEEQPFKGKSGFVTWIENKENNLGYWLMFYD
HCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE
YKTNNILIPVK
ECCCCEEEEEC
>Mature Secondary Structure 
AQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNEKCKISYYVQNIKKQSSPYHM
CCCCCCCEEEEEEEECCCCCEECCCCCCCCEEEECCCCCCEEEHHHHHHHHHCCCCEEE
VLICNKKGTKDIIKIGEMNIDEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNI
EEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHH
ISVMSGFSTTDIPAWKSFSIIESKERKKEDIKEEKVNKTIFDKYEETIEEIKIKDSSSVN
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
KDGDNKIKSVQEHKEKNLHSEIKEKDKNIKESNEKDLDSEDREKGRDIKEFNEKDLDNEG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCHH
REKGKDIKEADEKDLDSEDKERDKDIEKPNEKNLEKTKKSIEKNEDKKRNKQNIPVGLEG
HHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KYFRSLVEDLDSVDNITDEIKNCIWYKIDAKNEDDMRNTCNYDKFMVLYNPMLGYYPYIK
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCEEEEEECCHHHHHHHHH
KHGHYILGYKCDISGNMKYLVYGIPGDKTKEEQPFKGKSGFVTWIENKENNLGYWLMFYD
HCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE
YKTNNILIPVK
ECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA