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The map label for this gene is yabE [H]

Identifier: 226947303

GI number: 226947303

Start: 104047

End: 105105

Strand: Direct

Name: yabE [H]

Synonym: CLM_0122

Alternate gene names: 226947303

Gene position: 104047-105105 (Clockwise)

Preceding gene: 226947302

Following gene: 226947304

Centisome position: 2.5

GC content: 32.96

Gene sequence:

>1059_bases
ATGGTGGAAAAATTAAAGAAGAAAATTAAAGAACATTTTTCCAATGGTCCTAAGGCAATTTTGATTGTTGTAGTAATCTT
AATGATAGCGAGCATAGTAATTACTAATATGAGAAAAACAATAATTGTTTCAATAGACGGAAAAGAAAGCCAAAAAATTA
CAACATTTAAAAAAACATATGCAAAAGCCTTAACGTCGAAAAATATACAAGTGGGACCAAAGGACAAAGTTCAGCCCCAA
TTGGACGCTGAAATTAAAGACGGAAGCAAATTAAGCATAAAGAAAGCAGTTAAAGTTAATGTAGAAGTTGATGGTAAGAA
ATTAGCTATTCAATCCGCAGAAGACAATATAGGAGATATGCTAAAAAAAGAGGGTATACAAGTTAAAAAACTTGATAAAG
TAGCCCCAAGCAAAGAAGAAGAGATAAGAAAGGGATTGAAAGTAACAGTTACAAGAGTAGAAGAAAAAGTAATAAAGAGC
AAAAAAAATATGGATTATGAAACAGTAGTTAAAGAAGATGATTCCCTTGAAAAAGGTGACAAAAAAGTCATAAGGGAAGG
ACAAAATGGAGAAAAAGAAGTAACAACAAAAGTAGTTTTTGAAGATGGAAAAGAAAAAGTAAGAAAAGTAGTATCAGAAA
GCATAAAAAAGCAACCAGTATCTAAGGTAGTTGCAATGGGAACTAAAGTTACAACTGTTAACGCTCTTTCTAGAGGAGGA
AGTGTTACTGGTACGCCAGGTGGTAGATCATTAAGAATGAGAGCTACAGCATATACATCAAGTTATGAAGATACAGGTAA
GAGTCCTGGAAGCCCTGATTTTGGAGTTACAGCCACAGGAACTACAGCAAGAAGAAATTCAGGAGGATATAGTTCAATAG
CAGTAGATCCAAGGGTAATACCTTTAGGAACAAAACTGTTTGTTGAAGGTTATGGATATGCTATAGCAGAAGATACCGGT
GGAGCAATAAAAGGAAATGTTATTGATTTATATTTTGATTCCAATGTTGAAGTATCAAATTGGGGTTCAAGATGGGTAAA
TGTTTATATTTTAGATTAA

Upstream 100 bases:

>100_bases
CACAAAGGCTGCATTATTAACCAAAAAGCATGAGCAAATTTGACAGATTTAAATATACCGAATATAATAGCAATGTTGCT
CTTGCCCGAAGGAGGTTTTT

Downstream 100 bases:

>100_bases
TTTAAGTAGGAGCGTTAGCTCCTATTTTTTTCTATTAAAAATATTATATAATAGTTATATTGGAGGGATATTATGATTAA
GGAAGTTATAGTAGTAGAAG

Product: 3D/G5 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQ
LDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAEDNIGDMLKKEGIQVKKLDKVAPSKEEEIRKGLKVTVTRVEEKVIKS
KKNMDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
SVTGTPGGRSLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTG
GAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD

Sequences:

>Translated_352_residues
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQ
LDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAEDNIGDMLKKEGIQVKKLDKVAPSKEEEIRKGLKVTVTRVEEKVIKS
KKNMDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
SVTGTPGGRSLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTG
GAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD
>Mature_352_residues
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQ
LDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAEDNIGDMLKKEGIQVKKLDKVAPSKEEEIRKGLKVTVTRVEEKVIKS
KKNMDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
SVTGTPGGRSLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTG
GAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 38387; Mature: 38387

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTY
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
AKALTSKNIQVGPKDKVQPQLDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAEDNIGDM
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEECCCCHHHHH
LKKEGIQVKKLDKVAPSKEEEIRKGLKVTVTRVEEKVIKSKKNMDYETVVKEDDSLEKGD
HHHCCCCEEEHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
KKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
HHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEHHHHCCC
SVTGTPGGRSLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVI
CEECCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCEEE
PLGTKLFVEGYGYAIAEDTGGAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD
ECCCEEEEECCCEEEEECCCCEEECCEEEEEECCCEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTY
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
AKALTSKNIQVGPKDKVQPQLDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAEDNIGDM
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEECCCCHHHHH
LKKEGIQVKKLDKVAPSKEEEIRKGLKVTVTRVEEKVIKSKKNMDYETVVKEDDSLEKGD
HHHCCCCEEEHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
KKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
HHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEHHHHCCC
SVTGTPGGRSLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVI
CEECCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCEEE
PLGTKLFVEGYGYAIAEDTGGAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD
ECCCEEEEECCCEEEEECCCCEEECCEEEEEECCCEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]