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The map label for this gene is ycjQ [H]

Identifier: 226225386

GI number: 226225386

Start: 2891398

End: 2892450

Strand: Reverse

Name: ycjQ [H]

Synonym: Lm4b_02809

Alternate gene names: 226225386

Gene position: 2892450-2891398 (Counterclockwise)

Preceding gene: 226225387

Following gene: 226225385

Centisome position: 99.31

GC content: 42.07

Gene sequence:

>1053_bases
ATGAAAAAATTAGTAGCGACAGCGCCTCGTGTGGCGGAATTAATAGAATATAATGATCGTGAAGTTTTAGAAGATGAAGT
GAAAATTAAAGTTCAATTCGCTTCTCCAAAACATGGTACAGAAGTAGTTGATTTTAGAGGAATTAGTCCTTTTATTGATG
AAGAATTTTCACCAGAATGGAATTTATTTGTTTCACGTGAAACAAATAGTGCGCGAGGCATTGTATTTGGCGAGTTTCAG
CTAGGTAACATGGTCGTTGGTGAAGTAGTTGAATGTGGGAGCAAAGTAACAGAATACGAGCTTGGAGATATTGTTTGTTC
TTACGGACCGATTATGGAAACTGTTATTGTAAAAGCTGTCGATAATTATAAACTACGTAAATTGCCAAAAGGTGCTAATT
GGAAAAACGCGGTTTGCTATGACCCGGCTCAATTTGCGATGAGTGGCGTGCGTGATGCACATGTTCGTGCGGGCGATTAT
GTTGTTGTTGTCGGACTTGGTGCGATTGGTCAAATTGCGATTCAACTGGCGAAAAAAGCTGGAGCAAGTGTTGTTATCGG
GGTGGATCCACTTAGTCATCGTCGTGAAATTGCTGAAAAACATGGAGCAGATGCTACTTTTGATCCAATTACGACAGATG
TTGGCTTAGAAGTGAAGCGTCTTACTGGTAAACTTGGTGCGGATTCGATTATTGAAACGAGCGGGAATGCGGCTGCACTT
CAAGCGGCACTACGCGGAATAGCTTACGGCGGAACAATTTCTTATGTAGCCTTCGCGAAACCTTTCCCAGAAGGATTTAA
TCTTGGTCGGGAAGCTCATTTCAACAATGCGAAAATTGTCTTTTCACGTGCGGCTAGTGAACCAAATCCGGATTATCCGC
GCTGGGATCGTAAGCGTATCGAGGAGACTTGTTGGGAACTACTGATGAACGGTTACTTGGATTGTTCGGACATTATTGAT
CCAGTCGTTCCGTTTGCAGATTCAGCTGAGAGCTACATGAAATACGTCGATCAACAACCTGATTTAAGTATTAAAATGGG
GATTACCCTTTAA

Upstream 100 bases:

>100_bases
GGCGCTTCCAGTCGTTATTATGTACGCAATTTCAGAACGATTTATCAAAGGAAACTTAACAGACGGTGGAGTTAAGGGAT
AAGAAAGGAAGTTATTGAAA

Downstream 100 bases:

>100_bases
GGAGCGATAATAATGAAATTAGGCACACAAAACCAAGCATTTTTCCCAGAAAATATAGAAGAAAAATTTGCTTATGTAAA
AGAAATGGGCTTTGAAGGTT

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKKLVATAPRVAELIEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQ
LGNMVVGEVVECGSKVTEYELGDIVCSYGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDY
VVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAAL
QAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIID
PVVPFADSAESYMKYVDQQPDLSIKMGITL

Sequences:

>Translated_350_residues
MKKLVATAPRVAELIEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQ
LGNMVVGEVVECGSKVTEYELGDIVCSYGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDY
VVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAAL
QAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIID
PVVPFADSAESYMKYVDQQPDLSIKMGITL
>Mature_350_residues
MKKLVATAPRVAELIEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQ
LGNMVVGEVVECGSKVTEYELGDIVCSYGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDY
VVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAAL
QAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIID
PVVPFADSAESYMKYVDQQPDLSIKMGITL

Specific function: Unknown

COG id: COG1063

COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1787572, Length=350, Percent_Identity=76, Blast_Score=542, Evalue=1e-155,
Organism=Escherichia coli, GI1788073, Length=348, Percent_Identity=24.1379310344828, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6319955, Length=216, Percent_Identity=28.7037037037037, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322619, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 38359; Mature: 38359

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVATAPRVAELIEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEW
CCCHHHCCHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCEEEEECCCCHHHCCCCCCCE
NLFVSRETNSARGIVFGEFQLGNMVVGEVVECGSKVTEYELGDIVCSYGPIMETVIVKAV
EEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHEEHHHHHCCCCHHHHHHHHHHH
DNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDYVVVVGLGAIGQIAIQLAKKA
CCCHHHCCCCCCCCCCCEEECHHHHHHHCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHC
GASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAAL
CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHEECCCCHHHH
QAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRI
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
EETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure
MKKLVATAPRVAELIEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEW
CCCHHHCCHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCEEEEECCCCHHHCCCCCCCE
NLFVSRETNSARGIVFGEFQLGNMVVGEVVECGSKVTEYELGDIVCSYGPIMETVIVKAV
EEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHEEHHHHHCCCCHHHHHHHHHHH
DNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDYVVVVGLGAIGQIAIQLAKKA
CCCHHHCCCCCCCCCCCEEECHHHHHHHCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHC
GASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAAL
CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHEECCCCHHHH
QAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRI
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
EETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]