| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is ycjU [H]
Identifier: 226225381
GI number: 226225381
Start: 2885552
End: 2886214
Strand: Reverse
Name: ycjU [H]
Synonym: Lm4b_02804
Alternate gene names: 226225381
Gene position: 2886214-2885552 (Counterclockwise)
Preceding gene: 226225382
Following gene: 226225380
Centisome position: 99.09
GC content: 36.95
Gene sequence:
>663_bases ATGACAACAGCATTAAAAGGAGTAGTTTTCGATTTAGATGGCGTCATCACAGATACAGCACATTATCATTACTTAGCCTG GAAAAAAACAGCTGAGAGTATTGGAATCGAATTTGATGAAGCATTTAATGAGAAGTTAAAAGGGGTAAGCAGAATTGACT CCCTACTTCTTATTTTAAAGAAAGACGGCCGCGAAAATGACTTTACAGAAGAGCAGATTGAAGCTCTTGCAGCTGATAAA AATGACTTTTATGTTAGCTTGCTAAAAGAAATTACGCCAGCGGATGTTTTACCAGGAATTAAAGAACTTATAGTGGATCT TAAAAAGCAAAATCTCAAATGCGCAATTGCATCTGTTTCGAAAAATGCTCGGACGGTATTGAGTGCTCTTGAAATGGAAC AAGAATTTGATTACATTGTTGATGCGGCTAAAATTACTAAATCAAAACCTGATCCGGAAATTTTTGTGGAAGCATGTCGC GGTTTAGGTTTAGAAACATCAGAAGTAGTTGGGATTGAAGATGCCCAGGCTGGAATTGAAGCAATTAATGCAGCTGGAAT TGTAAGCGTTGGTGTTGGTTCTGGACTTCGTGATGCGGATATGACAGTGAAAAATACTGGTTTGCTAGATTTACGTATTT TAGAGATATTACATAGCAAATAA
Upstream 100 bases:
>100_bases TTGCCAAACCAGCAACTTTAGAAAATATACTGAAAGAAACACCAAATAATTTAAGAAGAACCGCGCGAAATGTTGCGGCA GTTTGGAAAGGACGAGTAGA
Downstream 100 bases:
>100_bases AATGTTTCACGTGAAACAAAAGTGTCAAAAAATGAACAAAAAGCAAGATATATTGCTATTCTAAAACCCTTTGCTTGACC ACAATACAACTTTGGAATAT
Product: phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADK NDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK
Sequences:
>Translated_220_residues MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADK NDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK >Mature_219_residues TTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADKN DFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRG LGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1787576, Length=202, Percent_Identity=52.4752475247525, Blast_Score=223, Evalue=9e-60, Organism=Escherichia coli, GI1789046, Length=195, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1788021, Length=192, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 23967; Mature: 23836
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILK CCCCHHHHEEECCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVS CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCEEEEEHHC KNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHEECCCHHHHHHH AINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK HHHHCCEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHCC >Mature Secondary Structure TTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILK CCCHHHHEEECCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVS CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCEEEEEHHC KNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHEECCCHHHHHHH AINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK HHHHCCEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]