Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is ycjU [H]

Identifier: 226225381

GI number: 226225381

Start: 2885552

End: 2886214

Strand: Reverse

Name: ycjU [H]

Synonym: Lm4b_02804

Alternate gene names: 226225381

Gene position: 2886214-2885552 (Counterclockwise)

Preceding gene: 226225382

Following gene: 226225380

Centisome position: 99.09

GC content: 36.95

Gene sequence:

>663_bases
ATGACAACAGCATTAAAAGGAGTAGTTTTCGATTTAGATGGCGTCATCACAGATACAGCACATTATCATTACTTAGCCTG
GAAAAAAACAGCTGAGAGTATTGGAATCGAATTTGATGAAGCATTTAATGAGAAGTTAAAAGGGGTAAGCAGAATTGACT
CCCTACTTCTTATTTTAAAGAAAGACGGCCGCGAAAATGACTTTACAGAAGAGCAGATTGAAGCTCTTGCAGCTGATAAA
AATGACTTTTATGTTAGCTTGCTAAAAGAAATTACGCCAGCGGATGTTTTACCAGGAATTAAAGAACTTATAGTGGATCT
TAAAAAGCAAAATCTCAAATGCGCAATTGCATCTGTTTCGAAAAATGCTCGGACGGTATTGAGTGCTCTTGAAATGGAAC
AAGAATTTGATTACATTGTTGATGCGGCTAAAATTACTAAATCAAAACCTGATCCGGAAATTTTTGTGGAAGCATGTCGC
GGTTTAGGTTTAGAAACATCAGAAGTAGTTGGGATTGAAGATGCCCAGGCTGGAATTGAAGCAATTAATGCAGCTGGAAT
TGTAAGCGTTGGTGTTGGTTCTGGACTTCGTGATGCGGATATGACAGTGAAAAATACTGGTTTGCTAGATTTACGTATTT
TAGAGATATTACATAGCAAATAA

Upstream 100 bases:

>100_bases
TTGCCAAACCAGCAACTTTAGAAAATATACTGAAAGAAACACCAAATAATTTAAGAAGAACCGCGCGAAATGTTGCGGCA
GTTTGGAAAGGACGAGTAGA

Downstream 100 bases:

>100_bases
AATGTTTCACGTGAAACAAAAGTGTCAAAAAATGAACAAAAAGCAAGATATATTGCTATTCTAAAACCCTTTGCTTGACC
ACAATACAACTTTGGAATAT

Product: phosphoglucomutase

Products: NA

Alternate protein names: Beta-PGM [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADK
NDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR
GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK

Sequences:

>Translated_220_residues
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADK
NDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR
GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK
>Mature_219_residues
TTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADKN
DFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRG
LGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK

Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1787576, Length=202, Percent_Identity=52.4752475247525, Blast_Score=223, Evalue=9e-60,
Organism=Escherichia coli, GI1789046, Length=195, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788021, Length=192, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR010972
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =5.4.2.6 [H]

Molecular weight: Translated: 23967; Mature: 23836

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILK
CCCCHHHHEEECCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVS
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCEEEEEHHC
KNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHEECCCHHHHHHH
AINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK
HHHHCCEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNEKLKGVSRIDSLLLILK
CCCHHHHEEECCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVS
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCEEEEEHHC
KNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHEECCCHHHHHHH
AINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILHSK
HHHHCCEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]