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The map label for this gene is yhcW [H]

Identifier: 226225348

GI number: 226225348

Start: 2851950

End: 2852606

Strand: Reverse

Name: yhcW [H]

Synonym: Lm4b_02771

Alternate gene names: 226225348

Gene position: 2852606-2851950 (Counterclockwise)

Preceding gene: 226225349

Following gene: 226225347

Centisome position: 97.94

GC content: 40.94

Gene sequence:

>657_bases
ATGTTAAAAGCGATTGTGATGGACTTTGACGGAATTGTTATTGATACAGAAGTAGTTTGGTATGAAATTTTTAAAGAATG
GTTTAAAACGAAGCAGAATTATGACCTTTCTATCGAGGAGTTTTTGCAGTGCGTTGGGTCAAATGTGGACGATTTGTTTC
GCGAACTCAACCGGACAGAGCAAATGGATATTAATCGACAAGACTTCGAAGCAGAAACACAAGCAACGTTTATTGAAAAC
AGTAAAAGTTTACCGGCCAAAGAAGGCGTGGAAAGCTTTATTCGTGAATTAAAAGAACGTGGATTAAAATTAGCACTTGC
GACCTCATCGCAGCGACCAAAACCACTCTATCATTTGGAACGACTAGGCTTGCTCGGATATTTTGATGCGATTATTACGG
CGGAGGATGTTACGCGAATCAAGCCGGATCCGGACTTGTTTTTAGAAGCTTTGAGAGCACTGGATGTTAAGCCATCGGAG
GCTCTTATCGTAGAAGACTCGCGAAATGGCCTTTTGGCGGGAAATAGTGCGGGTGTCCATGTTCTTGTCATTCCAAATGA
AGTAACAAAACATAGTGATTTAACCCCGAACTATTTGGAGCGAGAGTCGCTGGCGGAGGTAGATTTAACAGAAATAATGG
CTGAATATAATAAATAA

Upstream 100 bases:

>100_bases
TAGATAAAATAGTTGCAGACCGAGAACAAAAGAATTAACTTATTTGTAAGCGCTTCTTTTTAGGAGCGCTTTGAATAGTA
AAATGGGTAGGAGGAAGACA

Downstream 100 bases:

>100_bases
GGGGGCGCGAGCATGTTATTAGACCGAGTTACTTTAGAAGATATTGAGGTAAATTTAAAAGCAAAAGACTGGCGCGAAGC
CATCCAAACATCAGCAAGAC

Product: phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNRTEQMDINRQDFEAETQATFIEN
SKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLGYFDAIITAEDVTRIKPDPDLFLEALRALDVKPSE
ALIVEDSRNGLLAGNSAGVHVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK

Sequences:

>Translated_218_residues
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNRTEQMDINRQDFEAETQATFIEN
SKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLGYFDAIITAEDVTRIKPDPDLFLEALRALDVKPSE
ALIVEDSRNGLLAGNSAGVHVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
>Mature_218_residues
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNRTEQMDINRQDFEAETQATFIEN
SKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLGYFDAIITAEDVTRIKPDPDLFLEALRALDVKPSE
ALIVEDSRNGLLAGNSAGVHVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=191, Percent_Identity=26.7015706806283, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1789046, Length=183, Percent_Identity=26.2295081967213, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082080, Length=186, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788021, Length=193, Percent_Identity=29.0155440414508, Blast_Score=64, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17554716, Length=208, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116008157, Length=201, Percent_Identity=31.3432835820896, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17137324, Length=206, Percent_Identity=29.6116504854369, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24885; Mature: 24885

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNRTE
CCEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHH
QMDINRQDFEAETQATFIENSKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLE
HCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
RLGLLGYFDAIITAEDVTRIKPDPDLFLEALRALDVKPSEALIVEDSRNGLLAGNSAGVH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCEE
VLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNRTE
CCEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHH
QMDINRQDFEAETQATFIENSKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLE
HCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
RLGLLGYFDAIITAEDVTRIKPDPDLFLEALRALDVKPSEALIVEDSRNGLLAGNSAGVH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCEE
VLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]