Click here to switch to the map view.

The map label for this gene is adhR [H]

Identifier: 226225279

GI number: 226225279

Start: 2772535

End: 2772990

Strand: Direct

Name: adhR [H]

Synonym: Lm4b_02702

Alternate gene names: 226225279

Gene position: 2772535-2772990 (Clockwise)

Preceding gene: 226225278

Following gene: 226225280

Centisome position: 95.19

GC content: 39.91

Gene sequence:

>456_bases
ATGACCAAAAATAATATTAGTTTTTATGTAGTAGATGCTTCGGAAGAATTAACCATGAATATCAAAGAAGCTAGTGAAAA
AAGTGGCGTTTCTGCCGATACAATTCGCTACTATGAACGCATTGGTTTAATTCCACCCATCCACCGTAATGAAAGTGGGG
TTCGTAAATTTGGCGCAGAAGACCTACGATGGATTTTATTTACTCGCCAAATGCGCCGAGCTGGTTTGTCTATTGAAGCC
TTAATTGATTACTTGGCACTTTTCAGAGAAGGCGAACACACGCTGGAAGCTCGCGCCGAATTGCTGAAAAAGCAACGCAT
AGAGCTGAAAAATCGCATTGATGTTATGCAAGAAGCGCTCGATCGACTTGACTTCAAAATAGACAATTACGATACCCACC
TCATTCCGGCTCAAGAAGAACTAAAAGATTTTAATGTTGAAAGGAGTAATTCATAA

Upstream 100 bases:

>100_bases
TAGCAATCATGAATAAATGATCATGGTTGCTTTTTCGCTTGACTTAAAGTCCACTTCAAGGAATACAATCATTATAGAAA
ATCAGTAAAGGAGAATAGTC

Downstream 100 bases:

>100_bases
TGAGTACACTTGAAAACAGCGTTATTTTTGATAAAGGTGAACTGATTACTAATGACTACTTTACCGGTAATGCTTATTTA
AAAATGCTTGTCCCAGAAGA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEA
LIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS

Sequences:

>Translated_151_residues
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEA
LIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS
>Mature_150_residues
TKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEAL
IDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS

Specific function: Transcriptional regulator involved in the response to aldehyde stress. Binds to the promoter region of the adhA-yraA operon, the yraC and its own promoter region; binding is unchanged in the presence of aldehydes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 17633; Mature: 17502

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAE
CCCCCEEEEEEECCCHHEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCHH
DLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEAL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLDFKIDNYDTHLIPAQEELKDFNVERSNS
HHHCCEECCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAE
CCCCEEEEEEECCCHHEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCHH
DLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEAL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLDFKIDNYDTHLIPAQEELKDFNVERSNS
HHHCCEECCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9384377 [H]