| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yvgN [H]
Identifier: 226225252
GI number: 226225252
Start: 2746259
End: 2747101
Strand: Direct
Name: yvgN [H]
Synonym: Lm4b_02674
Alternate gene names: 226225252
Gene position: 2746259-2747101 (Clockwise)
Preceding gene: 226225250
Following gene: 226225261
Centisome position: 94.29
GC content: 41.4
Gene sequence:
>843_bases ATGACACTTTCTTTCTCGGATACATACAGACTGAACAATGGAATTGAAATGCCTAGACATGGTTTTGGGGTCTACAAGCT AACGGATGAAGCGCGTATGCGTACTGCGCTGGAAACCGCGGTGGATGTCGGGTATCGCTTGTTTGATACGGCTTCATTTT ACCATAATGAAAAAGAGCTTGGAGACTTTTTTGCGTCAAGTGGCTTGAAAAGAGATGAATTTTTCGTAACAACAAAGATG TGGAATACAGAGCAAGGTTACGATGAAACGCTTCGGGCTTTTGAAAAATCGCAGAAAAAACTACAATTGGACAAAATTGA TTTATATTTAGTCCATTGGCCAAAACAAGATACTTTTTTTGACACTTGGCGCGCTGTGGAAAAATTATATGACGAGGGAC TTGTTCGCGCAATTGGTGTAAGTAACTTTGAAGCGCATCATCTGGACCGCCTGCGTACAAGTGCCAATGTGCTTCCAGTA GTAGATCAACTCGAAACGCATCCGCACTTTCCGAATCATCTTTTACACCGCTATTTAGAAGAGCTACATATCGTTCACCA AGCTTGGAGCCCACTTGGCCGAGGTGGCGTTTTACAAGAGCAAATCCTTATTGACCTAGCGAAAAAACACGGAAAATCAC CTGCTCAAATCGTCCTTCGTTGGCATTTACAAAATAATATCTCCATTATTCCAAAATCAGAAACACCTTCAAGAATTAGA GAAAATGCAGCTATTTATGATTTTGAATTGTCAGAAGCAGATATGCGCCAAGTCGAGCGTTTAAATACTGGTGAACGTGT GAGCCACGCACCAGACGTAATGTATGTAAGATCAGAAATTTAG
Upstream 100 bases:
>100_bases TGGAATTTATAAAAAAATCGCATTTCTATCCTTCATTCTACAGAAATTCTCCATTTTCTGGTATGCTTAAGTTAATAAAC TAAAGTAGGAGGTAAATGAA
Downstream 100 bases:
>100_bases CCTAAAATAAAAATCTACTAAACCAATTTGGCTTAGTAGATTTTTTTATTTGTTTTTTAATTGTCTTGTACGTGCTTCTT TGAAAAGGTAAAAATAGCGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: GR; Methylglyoxal reductase [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKM WNTEQGYDETLRAFEKSQKKLQLDKIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPV VDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAKKHGKSPAQIVLRWHLQNNISIIPKSETPSRIR ENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI
Sequences:
>Translated_280_residues MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKM WNTEQGYDETLRAFEKSQKKLQLDKIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPV VDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAKKHGKSPAQIVLRWHLQNNISIIPKSETPSRIR ENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI >Mature_279_residues TLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMW NTEQGYDETLRAFEKSQKKLQLDKIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPVV DQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAKKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRE NAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI
Specific function: Reduces glyoxal and methylglyoxal. Is not involved in the vitamin B6 biosynthesis [H]
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Homo sapiens, GI24497577, Length=291, Percent_Identity=36.0824742268041, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI5174391, Length=291, Percent_Identity=36.0824742268041, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI223468663, Length=295, Percent_Identity=33.5593220338983, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI93277124, Length=307, Percent_Identity=34.2019543973941, Blast_Score=173, Evalue=1e-43, Organism=Homo sapiens, GI291291012, Length=273, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=7e-42, Organism=Homo sapiens, GI5453543, Length=298, Percent_Identity=32.8859060402685, Blast_Score=165, Evalue=4e-41, Organism=Homo sapiens, GI4502049, Length=294, Percent_Identity=36.0544217687075, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI310109920, Length=298, Percent_Identity=32.5503355704698, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI310109922, Length=278, Percent_Identity=33.4532374100719, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI24497583, Length=293, Percent_Identity=34.1296928327645, Blast_Score=161, Evalue=7e-40, Organism=Homo sapiens, GI45446745, Length=298, Percent_Identity=32.2147651006711, Blast_Score=160, Evalue=8e-40, Organism=Homo sapiens, GI4503285, Length=298, Percent_Identity=32.2147651006711, Blast_Score=160, Evalue=8e-40, Organism=Homo sapiens, GI24497585, Length=295, Percent_Identity=33.5593220338983, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI5174695, Length=296, Percent_Identity=32.0945945945946, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI300116273, Length=272, Percent_Identity=31.25, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI300116271, Length=276, Percent_Identity=30.4347826086957, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI310109924, Length=154, Percent_Identity=33.7662337662338, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI310109926, Length=128, Percent_Identity=35.15625, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI207028673, Length=128, Percent_Identity=34.375, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI87082198, Length=267, Percent_Identity=42.3220973782771, Blast_Score=229, Evalue=1e-61, Organism=Escherichia coli, GI1786400, Length=257, Percent_Identity=27.6264591439689, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788081, Length=281, Percent_Identity=28.8256227758007, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1787674, Length=275, Percent_Identity=26.5454545454545, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561298, Length=287, Percent_Identity=38.6759581881533, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71998625, Length=267, Percent_Identity=38.5767790262172, Blast_Score=194, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17564128, Length=300, Percent_Identity=37, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17537077, Length=295, Percent_Identity=33.2203389830508, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17537075, Length=295, Percent_Identity=33.5593220338983, Blast_Score=169, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17562292, Length=278, Percent_Identity=33.8129496402878, Blast_Score=164, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17550248, Length=298, Percent_Identity=33.5570469798658, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17538386, Length=273, Percent_Identity=32.967032967033, Blast_Score=163, Evalue=9e-41, Organism=Caenorhabditis elegans, GI17566692, Length=287, Percent_Identity=36.2369337979094, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17561300, Length=278, Percent_Identity=33.4532374100719, Blast_Score=150, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17552492, Length=276, Percent_Identity=28.6231884057971, Blast_Score=148, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17537079, Length=308, Percent_Identity=25.974025974026, Blast_Score=130, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6320576, Length=289, Percent_Identity=36.3321799307958, Blast_Score=182, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6324694, Length=294, Percent_Identity=35.3741496598639, Blast_Score=166, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6322556, Length=261, Percent_Identity=36.3984674329502, Blast_Score=161, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6321896, Length=312, Percent_Identity=30.1282051282051, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319625, Length=286, Percent_Identity=31.1188811188811, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6320079, Length=297, Percent_Identity=27.6094276094276, Blast_Score=102, Evalue=9e-23, Organism=Drosophila melanogaster, GI20129731, Length=292, Percent_Identity=36.986301369863, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI24663317, Length=299, Percent_Identity=34.7826086956522, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI24657054, Length=303, Percent_Identity=33.993399339934, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24662789, Length=298, Percent_Identity=33.5570469798658, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI45553081, Length=297, Percent_Identity=33.6700336700337, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24644950, Length=300, Percent_Identity=32.6666666666667, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI21356425, Length=289, Percent_Identity=33.9100346020761, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI221378297, Length=320, Percent_Identity=30.625, Blast_Score=154, Evalue=5e-38, Organism=Drosophila melanogaster, GI24662781, Length=276, Percent_Identity=35.1449275362319, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI24662785, Length=273, Percent_Identity=34.7985347985348, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI281366140, Length=257, Percent_Identity=33.0739299610895, Blast_Score=134, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.283 [H]
Molecular weight: Translated: 32612; Mature: 32481
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00798 ALDOKETO_REDUCTASE_1 ; PS00062 ALDOKETO_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKEL CCCCCCCCEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDKIDLYLVHWPKQDTFF HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHEEHEEEEEEEEECCCCCCHH DTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPVVDQLETHPHFPNHLLHRYLE HHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH ELHIVHQAWSPLGRGGVLQEQILIDLAKKHGKSPAQIVLRWHLQNNISIIPKSETPSRIR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCCEEEECCCCHHHHH ENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI CCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure TLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKEL CCCCCCCEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDKIDLYLVHWPKQDTFF HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHEEHEEEEEEEEECCCCCCHH DTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPVVDQLETHPHFPNHLLHRYLE HHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH ELHIVHQAWSPLGRGGVLQEQILIDLAKKHGKSPAQIVLRWHLQNNISIIPKSETPSRIR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCCEEEECCCCHHHHH ENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI CCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]