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The map label for this gene is 226225241

Identifier: 226225241

GI number: 226225241

Start: 2736356

End: 2736922

Strand: Reverse

Name: 226225241

Synonym: Lm4b_02663

Alternate gene names: NA

Gene position: 2736922-2736356 (Counterclockwise)

Preceding gene: 226225243

Following gene: 226225239

Centisome position: 93.97

GC content: 35.1

Gene sequence:

>567_bases
ATGATTACAAACGAATCCATCATGGATGCAACGCTTTGTATGATGGCGAAACACGGCATCAAAGGCTCCACAACAAGACA
ATTAGCAGAAGCCGCTGGAATAAATGAAGCTACGATTTTTAAAAAATTTAAGAGTAAAGACAATCTTATTCATATGACGC
TGGAAGTCCAATTTGAAAGTATGAAGGCGGAAATCAATCAATTTTTTGATAAAGATTTTGAGAGTGCCAAGGTGTTTCTA
CGTCAAGCGAGTCAATTTATTTCGGATATTTATGAAAAATATCGGGACTTTATGGTGATTTCTGTTCGAGAAATGGGCAG
CAAAGATATGGAATTTATTGATCCATCGATTGTGGAATATTTGTATGAACGGGTTAATCAAAAAGTAAAAGAAATGGTTC
CGAGTAAGAACTCTGCGCAAGAAGCAGATGCGATTTCTTTGATTTTAAATAGTGTTATTTTGCTTATTATGGTGGAAAAA
GTACGCGATGATATTTATAAGCGCCCGCCAACGATTACAACAACCGCAGATTCATTAGCAGATGTTTTGTTAAAATTATT
GAAATAA

Upstream 100 bases:

>100_bases
ATGATTGATATCGACAAATTGTAATTAAATTGTCAAAAAGGCTCGTCTTTGTTATACTGAATATAAGCAAGTGCTTACTT
AGTTGAACGGGGGTAAAATA

Downstream 100 bases:

>100_bases
ATCACGAAAAGTTAAATAAAAGTTAAGTATTTTACATTTTGTCTTGCGGGCTTAGATTTTCTATGTTAAACTCGTAGACG
ATTAGAGCGATAATAAATAT

Product: transcription regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFKSKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFL
RQASQFISDIYEKYRDFMVISVREMGSKDMEFIDPSIVEYLYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEK
VRDDIYKRPPTITTTADSLADVLLKLLK

Sequences:

>Translated_188_residues
MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFKSKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFL
RQASQFISDIYEKYRDFMVISVREMGSKDMEFIDPSIVEYLYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEK
VRDDIYKRPPTITTTADSLADVLLKLLK
>Mature_188_residues
MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFKSKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFL
RQASQFISDIYEKYRDFMVISVREMGSKDMEFIDPSIVEYLYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEK
VRDDIYKRPPTITTTADSLADVLLKLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21508; Mature: 21508

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50977 HTH_TETR_2 ; PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFKSKDNLIHMTLEVQFES
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHHHHH
MKAEINQFFDKDFESAKVFLRQASQFISDIYEKYRDFMVISVREMGSKDMEFIDPSIVEY
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHH
LYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEKVRDDIYKRPPTITTTADSLA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
DVLLKLLK
HHHHHHHC
>Mature Secondary Structure
MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFKSKDNLIHMTLEVQFES
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHHHHH
MKAEINQFFDKDFESAKVFLRQASQFISDIYEKYRDFMVISVREMGSKDMEFIDPSIVEY
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHH
LYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEKVRDDIYKRPPTITTTADSLA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
DVLLKLLK
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA