Click here to switch to the map view.

The map label for this gene is 226225240

Identifier: 226225240

GI number: 226225240

Start: 2735878

End: 2736324

Strand: Direct

Name: 226225240

Synonym: Lm4b_02662

Alternate gene names: NA

Gene position: 2735878-2736324 (Clockwise)

Preceding gene: 226225236

Following gene: 226225242

Centisome position: 93.93

GC content: 38.26

Gene sequence:

>447_bases
TTGCAGCTTGATTACTATAATACGAGTCCGGTTCTTCTACTTCCTCTCCCTGATGGTGGTCCATTGCCTTCATCTCCTTT
CGAATTTTATCTAAGCTTAATTATCAGAAAAAAAGATTTTAATTCCCAGATAATTATTTTCATAATAAACATGAAAAAAG
TCCTTACCAAAACCTTGGCAAGGACTTCTGAGTTTATACGCATACTAAAACAGACTCCCCTCGCTAAAGTTTTGGCACTA
TGCAACGTAAAGAATACTCTTAGCCACATTATGGAAAGCCTTAATCCGACAATCCCTGTTCTACCCATTGGCGTCTTTGG
ACATTTTTGGGCAGTGGCCTGTGTTTGCATAGGAGCCTCACCTAACAGGCAAAACTACATATTTATTATCGCTCTAATCG
TCTACGAGTTTAACATAGAAAATCTAAGCCCGCAAGACAAAATGTAA

Upstream 100 bases:

>100_bases
GCTTTTTTACATGTAGTTTTTTCATTTTCCTTGCCTCCAATTCTTTCTAGGCAAGCTGAGAATAACGTTTATGTGCGCCA
GAGATGAAGGTTAGTCACTC

Downstream 100 bases:

>100_bases
AATACTTAACTTTTATTTAACTTTTCGTGATTTATTTCAATAATTTTAACAAAACATCTGCTAATGAATCTGCGGTTGTT
GTAATCGTTGGCGGGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MQLDYYNTSPVLLLPLPDGGPLPSSPFEFYLSLIIRKKDFNSQIIIFIINMKKVLTKTLARTSEFIRILKQTPLAKVLAL
CNVKNTLSHIMESLNPTIPVLPIGVFGHFWAVACVCIGASPNRQNYIFIIALIVYEFNIENLSPQDKM

Sequences:

>Translated_148_residues
MQLDYYNTSPVLLLPLPDGGPLPSSPFEFYLSLIIRKKDFNSQIIIFIINMKKVLTKTLARTSEFIRILKQTPLAKVLAL
CNVKNTLSHIMESLNPTIPVLPIGVFGHFWAVACVCIGASPNRQNYIFIIALIVYEFNIENLSPQDKM
>Mature_148_residues
MQLDYYNTSPVLLLPLPDGGPLPSSPFEFYLSLIIRKKDFNSQIIIFIINMKKVLTKTLARTSEFIRILKQTPLAKVLAL
CNVKNTLSHIMESLNPTIPVLPIGVFGHFWAVACVCIGASPNRQNYIFIIALIVYEFNIENLSPQDKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16725; Mature: 16725

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDYYNTSPVLLLPLPDGGPLPSSPFEFYLSLIIRKKDFNSQIIIFIINMKKVLTKTLA
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH
RTSEFIRILKQTPLAKVLALCNVKNTLSHIMESLNPTIPVLPIGVFGHFWAVACVCIGAS
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCC
PNRQNYIFIIALIVYEFNIENLSPQDKM
CCCCCEEEEEEHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLDYYNTSPVLLLPLPDGGPLPSSPFEFYLSLIIRKKDFNSQIIIFIINMKKVLTKTLA
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH
RTSEFIRILKQTPLAKVLALCNVKNTLSHIMESLNPTIPVLPIGVFGHFWAVACVCIGAS
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCC
PNRQNYIFIIALIVYEFNIENLSPQDKM
CCCCCEEEEEEHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA