| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225199
Identifier: 226225199
GI number: 226225199
Start: 2692841
End: 2693590
Strand: Reverse
Name: 226225199
Synonym: Lm4b_02621b
Alternate gene names: NA
Gene position: 2693590-2692841 (Counterclockwise)
Preceding gene: 226225200
Following gene: 226225198
Centisome position: 92.48
GC content: 31.07
Gene sequence:
>750_bases ATGTGGTTATTTTTTAAACGGGATATATTATGGTTCCTTCAAGGGAATAAATGGAAAATAATAGGCTTGGGAATGCTTTT GATATTAGCAATTTTAATAAATGTTGTTAATGCAAAAAATGCATCGGGGACGATAGCAGATGTGTTTTTGAGCTTTTTAA AACAGGATAATGGGGCGGAAAATCCACTCACAAGTAGCTTGAATTGGATTATCATTCAAAGTTTGCCAGTTTTTCTATTT GGAAGTTATTTTTACAAGGAATTGTTTGCATTAGAGGAATTTATTACTATTCGCTTTAATAATAGAATGCTGCCCTTTCT TTCCAAAATTTTACTCATAATTACGCTGATGTTGATTTATTATTTTGTAATTATTGGGCTAGTAGTGTTTATTAGTTTTC TTTTTGGTATTCGTTTTGATGTACAACCGACGCTATTATTTATAGATTTAAATATGCCACTTTATGAAATGGGTTTGCAC TTTTTTGTTGGAGGGCTGGCACTTATCATGCTTCAATTGTTGCTTTCTATAATAATTAAACCATTTTATGCAATTACGGT AGTACTTATCATTATTGTGACCAATTGCTTTATTACAAACTTTTGGATTATCGGAAGCGTTTCGAATGTTGCTGGATTCG CTGAGGCAAATAATTGGCTGTTATTAAGTATTCAATTGGTATATATTATTTTGGTGATGCTCATTGGCGGAAATATTTAT CGAAAGACAGATTTATATAAACTAAACTAG
Upstream 100 bases:
>100_bases TTCTGCTTGGTTGGTGGGATTATTGTATTATTTTTAATAAGTTGGTTACTTACAGAGAAAAAAGATATGTTTCGAACCTC GAAAAAGAAGGTGCGTTAAT
Downstream 100 bases:
>100_bases GGAGAATATCGATGAATTATATAAAAGTTAATCATTTAACAAAAGTAATCAACAACAACACTGTACTAGATGATATTAAT TTTGAATTAAAGCAAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MWLFFKRDILWFLQGNKWKIIGLGMLLILAILINVVNAKNASGTIADVFLSFLKQDNGAENPLTSSLNWIIIQSLPVFLF GSYFYKELFALEEFITIRFNNRMLPFLSKILLIITLMLIYYFVIIGLVVFISFLFGIRFDVQPTLLFIDLNMPLYEMGLH FFVGGLALIMLQLLLSIIIKPFYAITVVLIIIVTNCFITNFWIIGSVSNVAGFAEANNWLLLSIQLVYIILVMLIGGNIY RKTDLYKLN
Sequences:
>Translated_249_residues MWLFFKRDILWFLQGNKWKIIGLGMLLILAILINVVNAKNASGTIADVFLSFLKQDNGAENPLTSSLNWIIIQSLPVFLF GSYFYKELFALEEFITIRFNNRMLPFLSKILLIITLMLIYYFVIIGLVVFISFLFGIRFDVQPTLLFIDLNMPLYEMGLH FFVGGLALIMLQLLLSIIIKPFYAITVVLIIIVTNCFITNFWIIGSVSNVAGFAEANNWLLLSIQLVYIILVMLIGGNIY RKTDLYKLN >Mature_249_residues MWLFFKRDILWFLQGNKWKIIGLGMLLILAILINVVNAKNASGTIADVFLSFLKQDNGAENPLTSSLNWIIIQSLPVFLF GSYFYKELFALEEFITIRFNNRMLPFLSKILLIITLMLIYYFVIIGLVVFISFLFGIRFDVQPTLLFIDLNMPLYEMGLH FFVGGLALIMLQLLLSIIIKPFYAITVVLIIIVTNCFITNFWIIGSVSNVAGFAEANNWLLLSIQLVYIILVMLIGGNIY RKTDLYKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28590; Mature: 28590
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLFFKRDILWFLQGNKWKIIGLGMLLILAILINVVNAKNASGTIADVFLSFLKQDNGAE CCEEEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC NPLTSSLNWIIIQSLPVFLFGSYFYKELFALEEFITIRFNNRMLPFLSKILLIITLMLIY CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHH YFVIIGLVVFISFLFGIRFDVQPTLLFIDLNMPLYEMGLHFFVGGLALIMLQLLLSIIIK HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PFYAITVVLIIIVTNCFITNFWIIGSVSNVAGFAEANNWLLLSIQLVYIILVMLIGGNIY HHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCEE RKTDLYKLN ECCCCEECC >Mature Secondary Structure MWLFFKRDILWFLQGNKWKIIGLGMLLILAILINVVNAKNASGTIADVFLSFLKQDNGAE CCEEEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC NPLTSSLNWIIIQSLPVFLFGSYFYKELFALEEFITIRFNNRMLPFLSKILLIITLMLIY CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHH YFVIIGLVVFISFLFGIRFDVQPTLLFIDLNMPLYEMGLHFFVGGLALIMLQLLLSIIIK HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PFYAITVVLIIIVTNCFITNFWIIGSVSNVAGFAEANNWLLLSIQLVYIILVMLIGGNIY HHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCEE RKTDLYKLN ECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA