| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is php [H]
Identifier: 226225192
GI number: 226225192
Start: 2686196
End: 2687188
Strand: Reverse
Name: php [H]
Synonym: Lm4b_02614
Alternate gene names: 226225192
Gene position: 2687188-2686196 (Counterclockwise)
Preceding gene: 226225193
Following gene: 226225191
Centisome position: 92.26
GC content: 39.88
Gene sequence:
>993_bases ATGAGTTTTATTCGTACTTTTTATGGAGATATTGCCCCTGAACAACTGGGCTTCACTTATTCACACGAGCACATCGTTTG TGTACCAGCTTACTGGCAAGAGCGAGATGCCGATGATTTACTTTTGGATGATAAAGAAAAATCACAACTTGATGTACAAG ATTTCGCCGATTTAGGAGGCAAAACAATTGTCGATGCAACCGCGGTTGATTACGGCAGACGCGTCTTAGATGTGGCGCAA ATTTCCAAAGAAACAGGCATCCAAATCGTTGGAACAGCTGGCTTTAACAAAAGTTTCTTATGGGACGGGAAGATTAAACC AGAACTGAAACCAATCATCGGGGATTTTGAAACCTACTATGAATGGATTGAAAATACTACTACAGACAAACTAACGGAAT TCGTTGTAAATGAAGTCGAAAATGGGCTTGAAGGAACGCCGTATAAGGCTGGTCAGGTGAAATTTGGCACTGGCTACAAT ATGATTACACCTTTAGAAGAAAAGACAATACGTGCGGTTGCAAGAGCACATCACGAGACAAAAGCACCAATTCATTCTCA CACAGAAGCGGGAACGATGGCTTTAGAACAAATCGAGATTTTAAAACAAGAAAATATCCCGTTAGAATACCTTTCTATTG GTCATATGGACCGCAACCTAGATCCGTATTATCACAAGCAAGTTGCCAAAACAGGCGCATTCATGTCATTTGATGGCATC GCAAAAATCAAATACGCACCAGAAAGCGCTCGGATTGCAGCGATTCTATATCTAGTTTCGGAAGGCTTTGAAGATCAAAT TTTAGTTAGTGGTGATACAGCACGCAAAACTTATTATAAACATTATGGTCACGGACCAGGACTTGAATATATCGCCAAAA AATGGGTGCCACGCTTTATTGATGAAGCAAACGAAAAAGGCTTTGACGGAGAAAAATTAGTTAAAAAATTCTTCGTGGAT AACCCAGCAAGATGTTTTACTTTTAAAAAATAG
Upstream 100 bases:
>100_bases TGTCAGCATGTTAGCGAAGTTATTCTTTTAAGTAAAATCTAAACCTCTTCCTTGTCTAGCATTCAAGAGGAAGAGGTTTT TTGAAAGGAAGTTTTAAAAA
Downstream 100 bases:
>100_bases GAGGCGAAATCTGTGTTATATGCAGATGAAAATTCATTTGATATTGGCGCGAAAATCACGAAAACAAAACCAGTCCTTTT GCCAATAGGAGCAGTCGAAG
Product: Phosphotriesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQ ISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYN MITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGI AKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVD NPARCFTFKK
Sequences:
>Translated_330_residues MSFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQ ISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYN MITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGI AKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVD NPARCFTFKK >Mature_329_residues SFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQI SKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNM ITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIA KIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDN PARCFTFKK
Specific function: Its real enzymatic activity is not yet known. It was tested for general esterase, aminopeptidase, sulfatase, phosphatase, carbonic anhydrase, phosphodiesterase, and phosphotriesterase activities with the following substrates:P- nitrophenyl acetate, L-alan
COG id: COG1735
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphotriesterase family [H]
Homologues:
Organism=Homo sapiens, GI20070186, Length=367, Percent_Identity=25.0681198910082, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI47933341, Length=367, Percent_Identity=25.0681198910082, Blast_Score=99, Evalue=6e-21, Organism=Escherichia coli, GI1789780, Length=313, Percent_Identity=28.4345047923323, Blast_Score=131, Evalue=8e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017947 - InterPro: IPR001559 [H]
Pfam domain/function: PF02126 PTE [H]
EC number: NA
Molecular weight: Translated: 37404; Mature: 37272
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGG CCHHHHHHCCCCHHHCCCEECCCEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHCCC KTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYY CEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCHHHHHCCHHHHH EWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHET HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH KAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGI CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEECCCC AKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFI EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH DEANEKGFDGEKLVKKFFVDNPARCFTFKK HHHCCCCCCHHHHHHHHHCCCCHHEEEECC >Mature Secondary Structure SFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGG CHHHHHHCCCCHHHCCCEECCCEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHCCC KTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYY CEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCHHHHHCCHHHHH EWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHET HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH KAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGI CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEECCCC AKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFI EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH DEANEKGFDGEKLVKKFFVDNPARCFTFKK HHHCCCCCCHHHHHHHHHCCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 9548740 [H]