| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225190
Identifier: 226225190
GI number: 226225190
Start: 2684755
End: 2685474
Strand: Reverse
Name: 226225190
Synonym: Lm4b_02612
Alternate gene names: NA
Gene position: 2685474-2684755 (Counterclockwise)
Preceding gene: 226225191
Following gene: 226225189
Centisome position: 92.2
GC content: 43.33
Gene sequence:
>720_bases TTGAACAAGAAAAAATTCGAAAATCTACCGAAATGGAATAATTTTGCGCTATTTAATTTTTTAGCGAAAGATAAGGAAAA TAGCCTGGAAGTCATGGAGGCGGCGCGCGGTTTTGCCGTTCCGGGAATCGTTGCAACGAACTACGAAACAGCAGAAGAAG CCGCAAATGTGGTGAAAGAATTACAAACAACAGCCCCCGTCATTAGTGTTGGTCTTGGTGGCGGTGGAGACTGGCAAAAC TGGCGTGATGTGCTTCATATTGCTCGTCTGGCTCCAAACAGTCATATTAACCAGCCAATCGAAACCGCGGGATTAACAAA TGACTTACTTCCGGAAACATACACTAATGCACTCGTTCGTCCAACCGGGAAAATCGGCATCGTCAAACTATCTTCCGGAG ACGAAATTACCGCTGAGGAAGCTGTCGATTATTGTCTATCCGCCAACATCCCGTCCATCAAATTTATGAGCATTGAAGGC ACGAAATATTTAGATGAACTAGTTTACTTAACAAAAATTGCGGCCGATAAAGGCATTTACGGTATTGAGCCAGCGGGAGG AATTGGAGCTGACAATATTCTTGAAATAACAACCGCCATCAAGTCCACCGGAATTCCCTTTTATATGCCGCATATTTTTG GAAAAACAATTGACAAAGCAACTGGCCGAACGAAACCGGAAGAAATCGAGAAAATTTTTGCAGCTTTGGAGGGGAATTAA
Upstream 100 bases:
>100_bases ACGAAGACAGCGGTTCTGGGAGAAGCAACTTTGGCAACAGCAGAAAAAGGCGAATACTTGATTGAAAAGACGTTAAAAAC ATGTGTGGAGTTGATAAAAC
Downstream 100 bases:
>100_bases ATGATTAATAACTATATCGATATTACAGTTCGTTTATTAGAAAACATTCTCGATAATGAAGCTGATTATGTAAAAGAAGC AGGAGCGAAGGTAGCCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIVATNYETAEEAANVVKELQTTAPVISVGLGGGGDWQN WRDVLHIARLAPNSHINQPIETAGLTNDLLPETYTNALVRPTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEG TKYLDELVYLTKIAADKGIYGIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTIDKATGRTKPEEIEKIFAALEGN
Sequences:
>Translated_239_residues MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIVATNYETAEEAANVVKELQTTAPVISVGLGGGGDWQN WRDVLHIARLAPNSHINQPIETAGLTNDLLPETYTNALVRPTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEG TKYLDELVYLTKIAADKGIYGIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTIDKATGRTKPEEIEKIFAALEGN >Mature_239_residues MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIVATNYETAEEAANVVKELQTTAPVISVGLGGGGDWQN WRDVLHIARLAPNSHINQPIETAGLTNDLLPETYTNALVRPTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEG TKYLDELVYLTKIAADKGIYGIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTIDKATGRTKPEEIEKIFAALEGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25930; Mature: 25930
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIVATNYETAEEAANVVKE CCCHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHH LQTTAPVISVGLGGGGDWQNWRDVLHIARLAPNSHINQPIETAGLTNDLLPETYTNALVR HHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHCCCHHHHHHHCC PTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEGTKYLDELVYLTKIAADKGIY CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC GIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTIDKATGRTKPEEIEKIFAALEGN CCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIVATNYETAEEAANVVKE CCCHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHH LQTTAPVISVGLGGGGDWQNWRDVLHIARLAPNSHINQPIETAGLTNDLLPETYTNALVR HHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHCCCHHHHHHHCC PTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEGTKYLDELVYLTKIAADKGIY CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC GIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTIDKATGRTKPEEIEKIFAALEGN CCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA